Protein–RNA interactions for Protein: Q3UZD5

Prdm6, Putative histone-lysine N-methyltransferase PRDM6, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm6Q3UZD5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Prdm6Q3UZD5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prdm6Q3UZD5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prdm6Q3UZD5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prdm6Q3UZD5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Prdm6Q3UZD5 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prdm6Q3UZD5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prdm6Q3UZD5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prdm6Q3UZD5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prdm6Q3UZD5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.95■□□□□ 0.62
Prdm6Q3UZD5 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prdm6Q3UZD5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prdm6Q3UZD5 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.95■□□□□ 0.62
Prdm6Q3UZD5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prdm6Q3UZD5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.95■□□□□ 0.62
Prdm6Q3UZD5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prdm6Q3UZD5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Prdm6Q3UZD5 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.95■□□□□ 0.62
Prdm6Q3UZD5 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prdm6Q3UZD5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prdm6Q3UZD5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prdm6Q3UZD5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.94■□□□□ 0.62
Prdm6Q3UZD5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Prdm6Q3UZD5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prdm6Q3UZD5 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.94■□□□□ 0.62
Prdm6Q3UZD5 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prdm6Q3UZD5 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prdm6Q3UZD5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Prdm6Q3UZD5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prdm6Q3UZD5 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
Prdm6Q3UZD5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prdm6Q3UZD5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prdm6Q3UZD5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prdm6Q3UZD5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prdm6Q3UZD5 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Prdm6Q3UZD5 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.93■□□□□ 0.62
Prdm6Q3UZD5 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prdm6Q3UZD5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prdm6Q3UZD5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prdm6Q3UZD5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prdm6Q3UZD5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Prdm6Q3UZD5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm6Q3UZD5 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm6Q3UZD5 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.92■□□□□ 0.62
Prdm6Q3UZD5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm6Q3UZD5 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm6Q3UZD5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm6Q3UZD5 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm6Q3UZD5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm6Q3UZD5 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm6Q3UZD5 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm6Q3UZD5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm6Q3UZD5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Prdm6Q3UZD5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Prdm6Q3UZD5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm6Q3UZD5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm6Q3UZD5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prdm6Q3UZD5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prdm6Q3UZD5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prdm6Q3UZD5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prdm6Q3UZD5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prdm6Q3UZD5 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.91■□□□□ 0.62
Prdm6Q3UZD5 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.91■□□□□ 0.62
Prdm6Q3UZD5 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prdm6Q3UZD5 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.91■□□□□ 0.62
Prdm6Q3UZD5 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.91■□□□□ 0.62
Prdm6Q3UZD5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prdm6Q3UZD5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm6Q3UZD5 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
Prdm6Q3UZD5 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm6Q3UZD5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm6Q3UZD5 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm6Q3UZD5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm6Q3UZD5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Prdm6Q3UZD5 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm6Q3UZD5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm6Q3UZD5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
Prdm6Q3UZD5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Prdm6Q3UZD5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Prdm6Q3UZD5 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm6Q3UZD5 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm6Q3UZD5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm6Q3UZD5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm6Q3UZD5 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm6Q3UZD5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm6Q3UZD5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Prdm6Q3UZD5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Prdm6Q3UZD5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prdm6Q3UZD5 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prdm6Q3UZD5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Prdm6Q3UZD5 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.88■□□□□ 0.61
Prdm6Q3UZD5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.88■□□□□ 0.61
Prdm6Q3UZD5 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prdm6Q3UZD5 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prdm6Q3UZD5 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prdm6Q3UZD5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Prdm6Q3UZD5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prdm6Q3UZD5 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Prdm6Q3UZD5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Prdm6Q3UZD5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms