Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Pfdn6Q03958 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pfdn6Q03958 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pfdn6Q03958 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pfdn6Q03958 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pfdn6Q03958 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pfdn6Q03958 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.49■□□□□ 0.71
Pfdn6Q03958 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.49■□□□□ 0.71
Pfdn6Q03958 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pfdn6Q03958 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pfdn6Q03958 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pfdn6Q03958 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
Pfdn6Q03958 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pfdn6Q03958 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pfdn6Q03958 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pfdn6Q03958 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pfdn6Q03958 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pfdn6Q03958 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pfdn6Q03958 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pfdn6Q03958 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pfdn6Q03958 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Pfdn6Q03958 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pfdn6Q03958 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pfdn6Q03958 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pfdn6Q03958 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pfdn6Q03958 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pfdn6Q03958 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Pfdn6Q03958 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pfdn6Q03958 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Pfdn6Q03958 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pfdn6Q03958 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pfdn6Q03958 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pfdn6Q03958 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pfdn6Q03958 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pfdn6Q03958 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pfdn6Q03958 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pfdn6Q03958 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pfdn6Q03958 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.46■□□□□ 0.71
Pfdn6Q03958 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Pfdn6Q03958 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pfdn6Q03958 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pfdn6Q03958 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.46■□□□□ 0.71
Pfdn6Q03958 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pfdn6Q03958 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pfdn6Q03958 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pfdn6Q03958 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.46■□□□□ 0.71
Pfdn6Q03958 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pfdn6Q03958 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Pfdn6Q03958 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pfdn6Q03958 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pfdn6Q03958 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pfdn6Q03958 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pfdn6Q03958 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pfdn6Q03958 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pfdn6Q03958 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pfdn6Q03958 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pfdn6Q03958 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Pfdn6Q03958 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pfdn6Q03958 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pfdn6Q03958 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn6Q03958 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn6Q03958 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Pfdn6Q03958 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn6Q03958 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn6Q03958 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pfdn6Q03958 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn6Q03958 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn6Q03958 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.44■□□□□ 0.7
Pfdn6Q03958 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pfdn6Q03958 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn6Q03958 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn6Q03958 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn6Q03958 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pfdn6Q03958 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pfdn6Q03958 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pfdn6Q03958 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pfdn6Q03958 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pfdn6Q03958 AA386476-201ENSMUST00000098781 1665 ntBASIC19.43■□□□□ 0.7
Pfdn6Q03958 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pfdn6Q03958 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pfdn6Q03958 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pfdn6Q03958 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pfdn6Q03958 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pfdn6Q03958 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pfdn6Q03958 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pfdn6Q03958 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.43■□□□□ 0.7
Pfdn6Q03958 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.42■□□□□ 0.7
Pfdn6Q03958 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pfdn6Q03958 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pfdn6Q03958 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.42■□□□□ 0.7
Pfdn6Q03958 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.42■□□□□ 0.7
Pfdn6Q03958 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pfdn6Q03958 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.42■□□□□ 0.7
Pfdn6Q03958 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.42■□□□□ 0.7
Pfdn6Q03958 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pfdn6Q03958 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pfdn6Q03958 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pfdn6Q03958 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Pfdn6Q03958 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pfdn6Q03958 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms