Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NrlP54846 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NrlP54846 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NrlP54846 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NrlP54846 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NrlP54846 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NrlP54846 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.74■□□□□ 0.91
NrlP54846 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NrlP54846 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NrlP54846 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NrlP54846 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NrlP54846 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
NrlP54846 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
NrlP54846 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NrlP54846 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NrlP54846 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NrlP54846 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NrlP54846 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.73■□□□□ 0.91
NrlP54846 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.73■□□□□ 0.91
NrlP54846 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NrlP54846 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NrlP54846 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NrlP54846 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NrlP54846 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NrlP54846 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
NrlP54846 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NrlP54846 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.72■□□□□ 0.91
NrlP54846 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NrlP54846 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NrlP54846 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.72■□□□□ 0.91
NrlP54846 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NrlP54846 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NrlP54846 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NrlP54846 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
NrlP54846 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NrlP54846 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NrlP54846 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.71■□□□□ 0.91
NrlP54846 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
NrlP54846 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NrlP54846 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.71■□□□□ 0.91
NrlP54846 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.71■□□□□ 0.91
NrlP54846 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.71■□□□□ 0.91
NrlP54846 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NrlP54846 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NrlP54846 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NrlP54846 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NrlP54846 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
NrlP54846 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NrlP54846 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NrlP54846 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NrlP54846 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NrlP54846 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NrlP54846 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NrlP54846 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NrlP54846 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NrlP54846 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
NrlP54846 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NrlP54846 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NrlP54846 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.69■□□□□ 0.9
NrlP54846 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NrlP54846 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NrlP54846 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NrlP54846 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.69■□□□□ 0.9
NrlP54846 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NrlP54846 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NrlP54846 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
NrlP54846 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.69■□□□□ 0.9
NrlP54846 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NrlP54846 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NrlP54846 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NrlP54846 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NrlP54846 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.68■□□□□ 0.9
NrlP54846 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.68■□□□□ 0.9
NrlP54846 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NrlP54846 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.68■□□□□ 0.9
NrlP54846 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NrlP54846 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.68■□□□□ 0.9
NrlP54846 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.68■□□□□ 0.9
NrlP54846 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NrlP54846 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NrlP54846 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
NrlP54846 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
NrlP54846 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NrlP54846 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NrlP54846 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NrlP54846 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.67■□□□□ 0.9
NrlP54846 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NrlP54846 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NrlP54846 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.67■□□□□ 0.9
NrlP54846 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.67■□□□□ 0.9
NrlP54846 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NrlP54846 Mir5133-201ENSMUST00000174955 77 ntBASIC20.66■□□□□ 0.9
NrlP54846 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.66■□□□□ 0.9
NrlP54846 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.66■□□□□ 0.9
NrlP54846 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NrlP54846 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NrlP54846 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NrlP54846 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NrlP54846 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NrlP54846 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms