Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Kdm5cP41230 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Kdm5cP41230 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC28.73■■■□□ 2.19
Kdm5cP41230 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Kdm5cP41230 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC28.73■■■□□ 2.19
Kdm5cP41230 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC28.73■■■□□ 2.19
Kdm5cP41230 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
Kdm5cP41230 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Kdm5cP41230 AC154266.1-201ENSMUST00000223190 503 ntBASIC28.72■■■□□ 2.19
Kdm5cP41230 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
Kdm5cP41230 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Kdm5cP41230 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
Kdm5cP41230 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Kdm5cP41230 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Kdm5cP41230 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Kdm5cP41230 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
Kdm5cP41230 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC28.71■■■□□ 2.19
Kdm5cP41230 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Kdm5cP41230 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Kdm5cP41230 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.18
Kdm5cP41230 AC130671.1-201ENSMUST00000227384 1237 ntBASIC28.7■■■□□ 2.18
Kdm5cP41230 AC131586.2-201ENSMUST00000228370 1512 ntBASIC28.7■■■□□ 2.18
Kdm5cP41230 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.18
Kdm5cP41230 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Kdm5cP41230 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
Kdm5cP41230 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
Kdm5cP41230 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Kdm5cP41230 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Kdm5cP41230 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
Kdm5cP41230 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Kdm5cP41230 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC28.68■■■□□ 2.18
Kdm5cP41230 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Kdm5cP41230 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Kdm5cP41230 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Kdm5cP41230 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC28.67■■■□□ 2.18
Kdm5cP41230 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Kdm5cP41230 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Kdm5cP41230 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Kdm5cP41230 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Kdm5cP41230 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC28.67■■■□□ 2.18
Kdm5cP41230 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
Kdm5cP41230 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
Kdm5cP41230 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC28.67■■■□□ 2.18
Kdm5cP41230 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Kdm5cP41230 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Kdm5cP41230 Gm5643-201ENSMUST00000117081 966 ntBASIC28.66■■■□□ 2.18
Kdm5cP41230 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Kdm5cP41230 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Kdm5cP41230 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
Kdm5cP41230 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Kdm5cP41230 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Kdm5cP41230 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC28.65■■■□□ 2.18
Kdm5cP41230 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Kdm5cP41230 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Kdm5cP41230 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Kdm5cP41230 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
Kdm5cP41230 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Kdm5cP41230 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
Kdm5cP41230 Dmtn-209ENSMUST00000228295 2572 ntBASIC28.64■■■□□ 2.17
Kdm5cP41230 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC28.63■■■□□ 2.17
Kdm5cP41230 Gm7860-201ENSMUST00000121190 879 ntBASIC28.62■■■□□ 2.17
Kdm5cP41230 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC28.62■■■□□ 2.17
Kdm5cP41230 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC28.62■■■□□ 2.17
Kdm5cP41230 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC28.62■■■□□ 2.17
Kdm5cP41230 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC28.62■■■□□ 2.17
Kdm5cP41230 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC28.62■■■□□ 2.17
Kdm5cP41230 Gm715-201ENSMUST00000117865 831 ntBASIC28.62■■■□□ 2.17
Kdm5cP41230 Gm12896-201ENSMUST00000118430 226 ntBASIC28.62■■■□□ 2.17
Kdm5cP41230 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Kdm5cP41230 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC28.61■■■□□ 2.17
Kdm5cP41230 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
Kdm5cP41230 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Kdm5cP41230 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
Kdm5cP41230 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Kdm5cP41230 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
Kdm5cP41230 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Kdm5cP41230 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC28.6■■■□□ 2.17
Kdm5cP41230 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Kdm5cP41230 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC28.6■■■□□ 2.17
Kdm5cP41230 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Kdm5cP41230 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
Kdm5cP41230 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Kdm5cP41230 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Kdm5cP41230 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Kdm5cP41230 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Kdm5cP41230 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Kdm5cP41230 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
Kdm5cP41230 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Kdm5cP41230 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC28.59■■■□□ 2.17
Kdm5cP41230 Gm43909-201ENSMUST00000203443 1876 ntBASIC28.59■■■□□ 2.17
Kdm5cP41230 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
Kdm5cP41230 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
Kdm5cP41230 Gm32051-202ENSMUST00000197905 2385 ntBASIC28.58■■■□□ 2.17
Kdm5cP41230 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC28.58■■■□□ 2.17
Kdm5cP41230 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Kdm5cP41230 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Kdm5cP41230 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Kdm5cP41230 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Kdm5cP41230 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
Kdm5cP41230 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms