Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.47■□□□□ 0.71
Fen1P39749 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.47■□□□□ 0.71
Fen1P39749 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.47■□□□□ 0.71
Fen1P39749 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.47■□□□□ 0.71
Fen1P39749 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.47■□□□□ 0.71
Fen1P39749 Rps24-207ENSMUST00000224568 714 ntBASIC19.47■□□□□ 0.71
Fen1P39749 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Fen1P39749 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fen1P39749 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fen1P39749 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fen1P39749 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fen1P39749 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fen1P39749 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fen1P39749 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Fen1P39749 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Fen1P39749 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fen1P39749 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fen1P39749 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Fen1P39749 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Fen1P39749 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fen1P39749 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fen1P39749 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fen1P39749 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fen1P39749 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Fen1P39749 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fen1P39749 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.46■□□□□ 0.71
Fen1P39749 Gm7143-201ENSMUST00000222811 859 ntBASIC19.46■□□□□ 0.71
Fen1P39749 Gm10232-201ENSMUST00000089221 720 ntBASIC19.46■□□□□ 0.71
Fen1P39749 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fen1P39749 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fen1P39749 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fen1P39749 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fen1P39749 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fen1P39749 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fen1P39749 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fen1P39749 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fen1P39749 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fen1P39749 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fen1P39749 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fen1P39749 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fen1P39749 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fen1P39749 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.45■□□□□ 0.7
Fen1P39749 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fen1P39749 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Fen1P39749 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Fen1P39749 Golph3-205ENSMUST00000228671 2842 ntBASIC19.45■□□□□ 0.7
Fen1P39749 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fen1P39749 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.44■□□□□ 0.7
Fen1P39749 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fen1P39749 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.44■□□□□ 0.7
Fen1P39749 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fen1P39749 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fen1P39749 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Fen1P39749 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fen1P39749 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fen1P39749 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fen1P39749 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fen1P39749 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fen1P39749 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Fen1P39749 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Fen1P39749 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fen1P39749 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Fen1P39749 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Fen1P39749 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fen1P39749 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fen1P39749 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Fen1P39749 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fen1P39749 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Fen1P39749 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.42■□□□□ 0.7
Fen1P39749 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.42■□□□□ 0.7
Fen1P39749 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.42■□□□□ 0.7
Fen1P39749 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fen1P39749 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fen1P39749 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Fen1P39749 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fen1P39749 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fen1P39749 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fen1P39749 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fen1P39749 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Fen1P39749 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Fen1P39749 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fen1P39749 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Fen1P39749 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fen1P39749 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fen1P39749 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fen1P39749 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fen1P39749 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fen1P39749 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.4■□□□□ 0.7
Fen1P39749 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fen1P39749 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.4■□□□□ 0.7
Fen1P39749 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fen1P39749 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Fen1P39749 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fen1P39749 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fen1P39749 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fen1P39749 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Fen1P39749 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Fen1P39749 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Fen1P39749 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Fen1P39749 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 109.8 ms