Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upk2P38575 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Upk2P38575 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.08■□□□□ 0.32
Upk2P38575 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upk2P38575 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk2P38575 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk2P38575 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Upk2P38575 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk2P38575 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk2P38575 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Upk2P38575 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk2P38575 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk2P38575 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.07■□□□□ 0.32
Upk2P38575 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Upk2P38575 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk2P38575 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Upk2P38575 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Upk2P38575 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk2P38575 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Upk2P38575 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.07■□□□□ 0.32
Upk2P38575 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Upk2P38575 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk2P38575 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Upk2P38575 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk2P38575 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Upk2P38575 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk2P38575 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk2P38575 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk2P38575 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Upk2P38575 Gm12251-201ENSMUST00000117893 792 ntBASIC17.06■□□□□ 0.32
Upk2P38575 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.06■□□□□ 0.32
Upk2P38575 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Upk2P38575 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk2P38575 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
Upk2P38575 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.05■□□□□ 0.32
Upk2P38575 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk2P38575 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk2P38575 Gm12821-201ENSMUST00000120022 600 ntBASIC17.05■□□□□ 0.32
Upk2P38575 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk2P38575 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk2P38575 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk2P38575 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk2P38575 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.05■□□□□ 0.32
Upk2P38575 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Upk2P38575 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk2P38575 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk2P38575 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk2P38575 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk2P38575 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.04■□□□□ 0.32
Upk2P38575 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.04■□□□□ 0.32
Upk2P38575 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Upk2P38575 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.04■□□□□ 0.32
Upk2P38575 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk2P38575 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Upk2P38575 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk2P38575 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Upk2P38575 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk2P38575 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk2P38575 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk2P38575 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Upk2P38575 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk2P38575 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk2P38575 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk2P38575 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk2P38575 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Upk2P38575 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Upk2P38575 Mir7075-201ENSMUST00000184187 82 ntBASIC17.03■□□□□ 0.32
Upk2P38575 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Upk2P38575 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk2P38575 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk2P38575 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk2P38575 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Upk2P38575 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk2P38575 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk2P38575 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Upk2P38575 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Upk2P38575 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.02■□□□□ 0.32
Upk2P38575 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Upk2P38575 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Upk2P38575 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.02■□□□□ 0.32
Upk2P38575 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.02■□□□□ 0.32
Upk2P38575 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk2P38575 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Upk2P38575 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk2P38575 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk2P38575 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk2P38575 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk2P38575 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Upk2P38575 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk2P38575 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk2P38575 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk2P38575 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk2P38575 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.01■□□□□ 0.31
Upk2P38575 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.01■□□□□ 0.31
Upk2P38575 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.01■□□□□ 0.31
Upk2P38575 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk2P38575 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk2P38575 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Upk2P38575 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk2P38575 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 771.2 ms