Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RetP35546 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RetP35546 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RetP35546 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RetP35546 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RetP35546 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RetP35546 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.2■□□□□ 0.5
RetP35546 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.2■□□□□ 0.5
RetP35546 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.2■□□□□ 0.5
RetP35546 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.2■□□□□ 0.5
RetP35546 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RetP35546 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RetP35546 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RetP35546 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RetP35546 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
RetP35546 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RetP35546 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RetP35546 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RetP35546 Gm43530-201ENSMUST00000195920 274 ntBASIC18.19■□□□□ 0.5
RetP35546 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RetP35546 Spcs1-204ENSMUST00000226782 949 ntBASIC18.19■□□□□ 0.5
RetP35546 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RetP35546 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.19■□□□□ 0.5
RetP35546 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RetP35546 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RetP35546 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RetP35546 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RetP35546 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RetP35546 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.18■□□□□ 0.5
RetP35546 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RetP35546 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RetP35546 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RetP35546 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
RetP35546 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RetP35546 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RetP35546 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RetP35546 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.18■□□□□ 0.5
RetP35546 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
RetP35546 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RetP35546 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RetP35546 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RetP35546 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RetP35546 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RetP35546 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RetP35546 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.17■□□□□ 0.5
RetP35546 Mir6236-201ENSMUST00000184437 123 ntBASIC18.17■□□□□ 0.5
RetP35546 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.17■□□□□ 0.5
RetP35546 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RetP35546 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RetP35546 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RetP35546 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RetP35546 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RetP35546 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RetP35546 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RetP35546 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RetP35546 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RetP35546 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.16■□□□□ 0.5
RetP35546 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RetP35546 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RetP35546 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RetP35546 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.16■□□□□ 0.5
RetP35546 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RetP35546 Golph3-202ENSMUST00000226517 2359 ntBASIC18.16■□□□□ 0.5
RetP35546 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RetP35546 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RetP35546 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RetP35546 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RetP35546 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RetP35546 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
RetP35546 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RetP35546 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.15■□□□□ 0.5
RetP35546 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.15■□□□□ 0.5
RetP35546 Gm37179-201ENSMUST00000194862 823 ntBASIC18.15■□□□□ 0.5
RetP35546 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RetP35546 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.15■□□□□ 0.5
RetP35546 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RetP35546 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RetP35546 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RetP35546 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RetP35546 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RetP35546 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.14■□□□□ 0.49
RetP35546 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RetP35546 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RetP35546 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RetP35546 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RetP35546 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RetP35546 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RetP35546 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RetP35546 Gm10849-201ENSMUST00000100397 618 ntBASIC18.14■□□□□ 0.49
RetP35546 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RetP35546 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
RetP35546 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
RetP35546 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RetP35546 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RetP35546 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RetP35546 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RetP35546 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
RetP35546 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RetP35546 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.13■□□□□ 0.49
RetP35546 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms