Protein–RNA interactions for Protein: P04944

Ig kappa chain V-VI region NQ5-78.2.6, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04944 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.12■□□□□ 0.01
P04944 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.12■□□□□ 0.01
P04944 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04944 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
P04944 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
P04944 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04944 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04944 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04944 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04944 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
P04944 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
P04944 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.11■□□□□ 0.01
P04944 Serp2-204ENSMUST00000228055 705 ntBASIC15.11■□□□□ 0.01
P04944 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04944 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
P04944 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04944 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04944 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
P04944 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
P04944 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
P04944 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.1■□□□□ 0.01
P04944 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
P04944 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
P04944 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
P04944 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.1■□□□□ 0.01
P04944 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04944 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.1■□□□□ 0.01
P04944 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04944 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04944 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04944 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
P04944 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
P04944 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04944 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04944 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04944 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04944 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04944 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04944 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04944 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
P04944 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04944 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04944 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04944 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.09■□□□□ 0.01
P04944 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
P04944 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
P04944 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04944 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04944 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.09■□□□□ 0.01
P04944 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04944 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04944 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04944 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
P04944 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
P04944 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.08■□□□□ 0
P04944 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.08■□□□□ 0
P04944 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
P04944 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.08■□□□□ 0
P04944 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
P04944 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.08■□□□□ 0
P04944 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
P04944 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
P04944 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
P04944 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.08■□□□□ 0
P04944 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
P04944 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
P04944 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
P04944 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.07■□□□□ 0
P04944 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.07■□□□□ 0
P04944 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
P04944 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
P04944 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
P04944 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
P04944 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
P04944 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
P04944 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
P04944 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.07■□□□□ 0
P04944 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.07■□□□□ 0
P04944 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
P04944 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.07■□□□□ 0
P04944 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
P04944 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
P04944 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
P04944 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.06■□□□□ 0
P04944 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
P04944 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
P04944 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.06■□□□□ 0
P04944 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
P04944 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.06■□□□□ 0
P04944 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
P04944 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
P04944 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.06■□□□□ 0
P04944 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.06■□□□□ 0
P04944 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.06■□□□□ 0
P04944 Gm9847-201ENSMUST00000052528 599 ntBASIC15.06■□□□□ 0
P04944 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
P04944 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.06■□□□□ 0
P04944 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
P04944 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.06■□□□□ 0
P04944 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms