Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tspan6O70401 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tspan6O70401 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Tspan6O70401 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.03■□□□□ 0.64
Tspan6O70401 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tspan6O70401 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tspan6O70401 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tspan6O70401 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tspan6O70401 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.02■□□□□ 0.64
Tspan6O70401 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Tspan6O70401 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tspan6O70401 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tspan6O70401 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Tspan6O70401 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tspan6O70401 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tspan6O70401 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tspan6O70401 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.02■□□□□ 0.63
Tspan6O70401 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tspan6O70401 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Tspan6O70401 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tspan6O70401 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tspan6O70401 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tspan6O70401 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tspan6O70401 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.01■□□□□ 0.63
Tspan6O70401 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tspan6O70401 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Tspan6O70401 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tspan6O70401 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tspan6O70401 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.01■□□□□ 0.63
Tspan6O70401 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tspan6O70401 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Tspan6O70401 Snhg20-203ENSMUST00000182811 2153 ntBASIC19■□□□□ 0.63
Tspan6O70401 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tspan6O70401 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tspan6O70401 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tspan6O70401 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19■□□□□ 0.63
Tspan6O70401 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tspan6O70401 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tspan6O70401 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tspan6O70401 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tspan6O70401 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19■□□□□ 0.63
Tspan6O70401 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19■□□□□ 0.63
Tspan6O70401 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Tspan6O70401 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Tspan6O70401 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Tspan6O70401 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tspan6O70401 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Tspan6O70401 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tspan6O70401 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tspan6O70401 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tspan6O70401 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tspan6O70401 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tspan6O70401 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Tspan6O70401 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tspan6O70401 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.99■□□□□ 0.63
Tspan6O70401 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tspan6O70401 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tspan6O70401 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tspan6O70401 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tspan6O70401 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tspan6O70401 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tspan6O70401 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tspan6O70401 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.98■□□□□ 0.63
Tspan6O70401 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tspan6O70401 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.98■□□□□ 0.63
Tspan6O70401 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tspan6O70401 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tspan6O70401 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tspan6O70401 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tspan6O70401 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tspan6O70401 Mir5133-201ENSMUST00000174955 77 ntBASIC18.97■□□□□ 0.63
Tspan6O70401 Gm38205-201ENSMUST00000192243 258 ntBASIC18.97■□□□□ 0.63
Tspan6O70401 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.97■□□□□ 0.63
Tspan6O70401 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tspan6O70401 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tspan6O70401 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tspan6O70401 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Tspan6O70401 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tspan6O70401 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tspan6O70401 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.97■□□□□ 0.63
Tspan6O70401 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Tspan6O70401 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tspan6O70401 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tspan6O70401 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tspan6O70401 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.96■□□□□ 0.63
Tspan6O70401 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tspan6O70401 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tspan6O70401 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tspan6O70401 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.96■□□□□ 0.63
Tspan6O70401 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Tspan6O70401 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Tspan6O70401 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tspan6O70401 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
Tspan6O70401 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Tspan6O70401 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tspan6O70401 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tspan6O70401 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Tspan6O70401 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Tspan6O70401 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Tspan6O70401 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms