Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hps1O08983 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.91■□□□□ 0.46
Hps1O08983 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hps1O08983 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hps1O08983 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Hps1O08983 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hps1O08983 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hps1O08983 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hps1O08983 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hps1O08983 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hps1O08983 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Hps1O08983 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hps1O08983 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hps1O08983 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
Hps1O08983 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hps1O08983 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hps1O08983 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hps1O08983 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.9■□□□□ 0.46
Hps1O08983 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hps1O08983 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Hps1O08983 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hps1O08983 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Hps1O08983 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hps1O08983 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.89■□□□□ 0.45
Hps1O08983 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hps1O08983 Golgb1-201ENSMUST00000023534 498 ntBASIC17.89■□□□□ 0.45
Hps1O08983 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Hps1O08983 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Hps1O08983 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.89■□□□□ 0.45
Hps1O08983 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.89■□□□□ 0.45
Hps1O08983 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hps1O08983 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Hps1O08983 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hps1O08983 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hps1O08983 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Hps1O08983 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hps1O08983 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hps1O08983 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Hps1O08983 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps1O08983 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps1O08983 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps1O08983 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps1O08983 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps1O08983 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps1O08983 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps1O08983 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps1O08983 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps1O08983 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
Hps1O08983 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps1O08983 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps1O08983 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.88■□□□□ 0.45
Hps1O08983 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hps1O08983 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps1O08983 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps1O08983 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hps1O08983 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps1O08983 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Hps1O08983 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Hps1O08983 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps1O08983 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps1O08983 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hps1O08983 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Hps1O08983 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Hps1O08983 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Hps1O08983 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hps1O08983 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hps1O08983 Gm8495-201ENSMUST00000188740 694 ntBASIC17.87■□□□□ 0.45
Hps1O08983 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hps1O08983 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Hps1O08983 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hps1O08983 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hps1O08983 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.87■□□□□ 0.45
Hps1O08983 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hps1O08983 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hps1O08983 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hps1O08983 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hps1O08983 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hps1O08983 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hps1O08983 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps1O08983 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hps1O08983 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hps1O08983 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps1O08983 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps1O08983 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hps1O08983 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hps1O08983 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps1O08983 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps1O08983 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps1O08983 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps1O08983 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hps1O08983 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
Hps1O08983 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hps1O08983 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hps1O08983 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hps1O08983 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hps1O08983 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.85■□□□□ 0.45
Hps1O08983 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hps1O08983 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.85■□□□□ 0.45
Hps1O08983 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Hps1O08983 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms