Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Ccdc141E9Q8Q6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
Ccdc141E9Q8Q6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
Ccdc141E9Q8Q6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC29.77■■■□□ 2.36
Ccdc141E9Q8Q6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC29.77■■■□□ 2.36
Ccdc141E9Q8Q6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.36
Ccdc141E9Q8Q6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.36
Ccdc141E9Q8Q6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Ccdc141E9Q8Q6 Gm26766-202ENSMUST00000227544 2347 ntBASIC29.76■■■□□ 2.35
Ccdc141E9Q8Q6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Ccdc141E9Q8Q6 AA386476-201ENSMUST00000098781 1665 ntBASIC29.76■■■□□ 2.35
Ccdc141E9Q8Q6 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Ccdc141E9Q8Q6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Ccdc141E9Q8Q6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC29.75■■■□□ 2.35
Ccdc141E9Q8Q6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC29.75■■■□□ 2.35
Ccdc141E9Q8Q6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC29.75■■■□□ 2.35
Ccdc141E9Q8Q6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC29.75■■■□□ 2.35
Ccdc141E9Q8Q6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Ccdc141E9Q8Q6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Ccdc141E9Q8Q6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.35
Ccdc141E9Q8Q6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Ccdc141E9Q8Q6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Ccdc141E9Q8Q6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC29.74■■■□□ 2.35
Ccdc141E9Q8Q6 Gm7977-201ENSMUST00000193787 748 ntBASIC29.74■■■□□ 2.35
Ccdc141E9Q8Q6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Ccdc141E9Q8Q6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Ccdc141E9Q8Q6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Ccdc141E9Q8Q6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Ccdc141E9Q8Q6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Ccdc141E9Q8Q6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Ccdc141E9Q8Q6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC29.73■■■□□ 2.35
Ccdc141E9Q8Q6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC29.73■■■□□ 2.35
Ccdc141E9Q8Q6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC29.73■■■□□ 2.35
Ccdc141E9Q8Q6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Ccdc141E9Q8Q6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Ccdc141E9Q8Q6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Ccdc141E9Q8Q6 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
Ccdc141E9Q8Q6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC29.72■■■□□ 2.35
Ccdc141E9Q8Q6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Ccdc141E9Q8Q6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Ccdc141E9Q8Q6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Ccdc141E9Q8Q6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ccdc141E9Q8Q6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ccdc141E9Q8Q6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC29.71■■■□□ 2.35
Ccdc141E9Q8Q6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ccdc141E9Q8Q6 AC135963.1-201ENSMUST00000211640 717 ntBASIC29.71■■■□□ 2.35
Ccdc141E9Q8Q6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Ccdc141E9Q8Q6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
Ccdc141E9Q8Q6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC29.7■■■□□ 2.35
Ccdc141E9Q8Q6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Ccdc141E9Q8Q6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC29.7■■■□□ 2.34
Ccdc141E9Q8Q6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
Ccdc141E9Q8Q6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Ccdc141E9Q8Q6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC29.69■■■□□ 2.34
Ccdc141E9Q8Q6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Ccdc141E9Q8Q6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC29.69■■■□□ 2.34
Ccdc141E9Q8Q6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Ccdc141E9Q8Q6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Ccdc141E9Q8Q6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Ccdc141E9Q8Q6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Ccdc141E9Q8Q6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC29.68■■■□□ 2.34
Ccdc141E9Q8Q6 Gm15043-201ENSMUST00000118843 1543 ntBASIC29.68■■■□□ 2.34
Ccdc141E9Q8Q6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Ccdc141E9Q8Q6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC29.68■■■□□ 2.34
Ccdc141E9Q8Q6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Ccdc141E9Q8Q6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Ccdc141E9Q8Q6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
Ccdc141E9Q8Q6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Ccdc141E9Q8Q6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC29.67■■■□□ 2.34
Ccdc141E9Q8Q6 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ccdc141E9Q8Q6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ccdc141E9Q8Q6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ccdc141E9Q8Q6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC29.66■■■□□ 2.34
Ccdc141E9Q8Q6 Gm12896-201ENSMUST00000118430 226 ntBASIC29.66■■■□□ 2.34
Ccdc141E9Q8Q6 Gm27032-201ENSMUST00000183124 1116 ntBASIC29.66■■■□□ 2.34
Ccdc141E9Q8Q6 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ccdc141E9Q8Q6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ccdc141E9Q8Q6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Ccdc141E9Q8Q6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Ccdc141E9Q8Q6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
Ccdc141E9Q8Q6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
Ccdc141E9Q8Q6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Ccdc141E9Q8Q6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Ccdc141E9Q8Q6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC29.65■■■□□ 2.34
Ccdc141E9Q8Q6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Ccdc141E9Q8Q6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC29.65■■■□□ 2.34
Ccdc141E9Q8Q6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.34
Ccdc141E9Q8Q6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC29.64■■■□□ 2.34
Ccdc141E9Q8Q6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC29.64■■■□□ 2.34
Ccdc141E9Q8Q6 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Ccdc141E9Q8Q6 Gm13509-201ENSMUST00000119733 1308 ntBASIC29.64■■■□□ 2.34
Ccdc141E9Q8Q6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
Ccdc141E9Q8Q6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC29.63■■■□□ 2.33
Ccdc141E9Q8Q6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
Ccdc141E9Q8Q6 Gm13836-201ENSMUST00000121159 501 ntBASIC29.63■■■□□ 2.33
Ccdc141E9Q8Q6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Ccdc141E9Q8Q6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC29.63■■■□□ 2.33
Ccdc141E9Q8Q6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC29.63■■■□□ 2.33
Ccdc141E9Q8Q6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
Ccdc141E9Q8Q6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms