Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Gm12922-201ENSMUST00000120626 809 ntBASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Gm5878E9PUB3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm5878E9PUB3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm5878E9PUB3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm5878E9PUB3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Gm5878E9PUB3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm5878E9PUB3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm5878E9PUB3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm5878E9PUB3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Gm5878E9PUB3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm5878E9PUB3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gm5878E9PUB3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm5878E9PUB3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Gm5878E9PUB3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Gm5878E9PUB3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm5878E9PUB3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Gm5878E9PUB3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm5878E9PUB3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.59□□□□□ -0.07
Gm5878E9PUB3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm5878E9PUB3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Gm5878E9PUB3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Gm5878E9PUB3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm5878E9PUB3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
Gm5878E9PUB3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm5878E9PUB3 Rps24-207ENSMUST00000224568 714 ntBASIC14.58□□□□□ -0.08
Gm5878E9PUB3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm5878E9PUB3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm5878E9PUB3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm5878E9PUB3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Gm5878E9PUB3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm5878E9PUB3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Gm5878E9PUB3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Gm5878E9PUB3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.58□□□□□ -0.08
Gm5878E9PUB3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm5878E9PUB3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm5878E9PUB3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Gm5878E9PUB3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Gm5878E9PUB3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm5878E9PUB3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm5878E9PUB3 Gm10571-201ENSMUST00000097869 1638 ntBASIC14.57□□□□□ -0.08
Gm5878E9PUB3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Gm5878E9PUB3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.57□□□□□ -0.08
Gm5878E9PUB3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm5878E9PUB3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm5878E9PUB3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm5878E9PUB3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm5878E9PUB3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Gm5878E9PUB3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Gm5878E9PUB3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm5878E9PUB3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Gm5878E9PUB3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Gm5878E9PUB3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm5878E9PUB3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm5878E9PUB3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gm5878E9PUB3 Gm14117-201ENSMUST00000122417 843 ntBASIC14.56□□□□□ -0.08
Gm5878E9PUB3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.56□□□□□ -0.08
Gm5878E9PUB3 Serp2-204ENSMUST00000228055 705 ntBASIC14.56□□□□□ -0.08
Gm5878E9PUB3 Golgb1-201ENSMUST00000023534 498 ntBASIC14.56□□□□□ -0.08
Gm5878E9PUB3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm5878E9PUB3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm5878E9PUB3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gm5878E9PUB3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Gm5878E9PUB3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm5878E9PUB3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm5878E9PUB3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.55□□□□□ -0.08
Gm5878E9PUB3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Gm5878E9PUB3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm5878E9PUB3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm5878E9PUB3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm5878E9PUB3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14.55□□□□□ -0.08
Gm5878E9PUB3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Gm5878E9PUB3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms