Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trim33Q99PP7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim33Q99PP7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.28■□□□□ 0.68
Trim33Q99PP7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim33Q99PP7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim33Q99PP7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim33Q99PP7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim33Q99PP7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim33Q99PP7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trim33Q99PP7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim33Q99PP7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim33Q99PP7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trim33Q99PP7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim33Q99PP7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim33Q99PP7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim33Q99PP7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim33Q99PP7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim33Q99PP7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim33Q99PP7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim33Q99PP7 Mir7075-201ENSMUST00000184187 82 ntBASIC19.27■□□□□ 0.68
Trim33Q99PP7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim33Q99PP7 Spcs1-204ENSMUST00000226782 949 ntBASIC19.27■□□□□ 0.68
Trim33Q99PP7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.27■□□□□ 0.68
Trim33Q99PP7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trim33Q99PP7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trim33Q99PP7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trim33Q99PP7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim33Q99PP7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Trim33Q99PP7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim33Q99PP7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim33Q99PP7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim33Q99PP7 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.26■□□□□ 0.67
Trim33Q99PP7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim33Q99PP7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim33Q99PP7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trim33Q99PP7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim33Q99PP7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Trim33Q99PP7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.26■□□□□ 0.67
Trim33Q99PP7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim33Q99PP7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim33Q99PP7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim33Q99PP7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim33Q99PP7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim33Q99PP7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim33Q99PP7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim33Q99PP7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim33Q99PP7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim33Q99PP7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim33Q99PP7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim33Q99PP7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim33Q99PP7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim33Q99PP7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim33Q99PP7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim33Q99PP7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Trim33Q99PP7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim33Q99PP7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim33Q99PP7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim33Q99PP7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim33Q99PP7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim33Q99PP7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim33Q99PP7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim33Q99PP7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Trim33Q99PP7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Trim33Q99PP7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim33Q99PP7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim33Q99PP7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim33Q99PP7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim33Q99PP7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim33Q99PP7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim33Q99PP7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Trim33Q99PP7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim33Q99PP7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim33Q99PP7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim33Q99PP7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.23■□□□□ 0.67
Trim33Q99PP7 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.23■□□□□ 0.67
Trim33Q99PP7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim33Q99PP7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim33Q99PP7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim33Q99PP7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim33Q99PP7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim33Q99PP7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim33Q99PP7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim33Q99PP7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Trim33Q99PP7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim33Q99PP7 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim33Q99PP7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim33Q99PP7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim33Q99PP7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Trim33Q99PP7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim33Q99PP7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim33Q99PP7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim33Q99PP7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim33Q99PP7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim33Q99PP7 Golph3-202ENSMUST00000226517 2359 ntBASIC19.21■□□□□ 0.67
Trim33Q99PP7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim33Q99PP7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.21■□□□□ 0.67
Trim33Q99PP7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim33Q99PP7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim33Q99PP7 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.21■□□□□ 0.67
Trim33Q99PP7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 127.5 ms