Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scrt1Q99M85 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scrt1Q99M85 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scrt1Q99M85 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scrt1Q99M85 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scrt1Q99M85 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scrt1Q99M85 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scrt1Q99M85 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scrt1Q99M85 Gm10653-202ENSMUST00000139570 835 ntBASIC17.1■□□□□ 0.33
Scrt1Q99M85 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scrt1Q99M85 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Scrt1Q99M85 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Scrt1Q99M85 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scrt1Q99M85 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Scrt1Q99M85 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Scrt1Q99M85 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scrt1Q99M85 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scrt1Q99M85 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scrt1Q99M85 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scrt1Q99M85 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scrt1Q99M85 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scrt1Q99M85 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scrt1Q99M85 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Scrt1Q99M85 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scrt1Q99M85 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Scrt1Q99M85 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scrt1Q99M85 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scrt1Q99M85 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.09■□□□□ 0.33
Scrt1Q99M85 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.09■□□□□ 0.33
Scrt1Q99M85 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scrt1Q99M85 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scrt1Q99M85 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.09■□□□□ 0.33
Scrt1Q99M85 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scrt1Q99M85 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scrt1Q99M85 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scrt1Q99M85 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scrt1Q99M85 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Scrt1Q99M85 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scrt1Q99M85 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Scrt1Q99M85 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Scrt1Q99M85 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Scrt1Q99M85 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scrt1Q99M85 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Scrt1Q99M85 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Scrt1Q99M85 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Scrt1Q99M85 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Scrt1Q99M85 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.08■□□□□ 0.33
Scrt1Q99M85 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Scrt1Q99M85 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Scrt1Q99M85 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.08■□□□□ 0.32
Scrt1Q99M85 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scrt1Q99M85 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.08■□□□□ 0.32
Scrt1Q99M85 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Scrt1Q99M85 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Scrt1Q99M85 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scrt1Q99M85 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Scrt1Q99M85 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Scrt1Q99M85 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scrt1Q99M85 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scrt1Q99M85 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scrt1Q99M85 Reep4-203ENSMUST00000226563 1444 ntBASIC17.07■□□□□ 0.32
Scrt1Q99M85 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scrt1Q99M85 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scrt1Q99M85 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Scrt1Q99M85 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scrt1Q99M85 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.07■□□□□ 0.32
Scrt1Q99M85 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scrt1Q99M85 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scrt1Q99M85 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.07■□□□□ 0.32
Scrt1Q99M85 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Scrt1Q99M85 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scrt1Q99M85 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scrt1Q99M85 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scrt1Q99M85 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scrt1Q99M85 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scrt1Q99M85 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scrt1Q99M85 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Scrt1Q99M85 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Scrt1Q99M85 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.06■□□□□ 0.32
Scrt1Q99M85 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.06■□□□□ 0.32
Scrt1Q99M85 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.06■□□□□ 0.32
Scrt1Q99M85 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scrt1Q99M85 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Scrt1Q99M85 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Scrt1Q99M85 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scrt1Q99M85 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scrt1Q99M85 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Scrt1Q99M85 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scrt1Q99M85 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Scrt1Q99M85 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.05■□□□□ 0.32
Scrt1Q99M85 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scrt1Q99M85 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.05■□□□□ 0.32
Scrt1Q99M85 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scrt1Q99M85 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.05■□□□□ 0.32
Scrt1Q99M85 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scrt1Q99M85 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scrt1Q99M85 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scrt1Q99M85 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scrt1Q99M85 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scrt1Q99M85 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms