Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.23■□□□□ 0.83
Cdk5rap3Q99LM2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdk5rap3Q99LM2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.23■□□□□ 0.83
Cdk5rap3Q99LM2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cdk5rap3Q99LM2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cdk5rap3Q99LM2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdk5rap3Q99LM2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdk5rap3Q99LM2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdk5rap3Q99LM2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
Cdk5rap3Q99LM2 Gm22238-201ENSMUST00000175222 88 ntBASIC20.22■□□□□ 0.83
Cdk5rap3Q99LM2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdk5rap3Q99LM2 Gm9959-201ENSMUST00000068277 390 ntBASIC20.22■□□□□ 0.83
Cdk5rap3Q99LM2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdk5rap3Q99LM2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdk5rap3Q99LM2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Cdk5rap3Q99LM2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cdk5rap3Q99LM2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Cdk5rap3Q99LM2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cdk5rap3Q99LM2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.21■□□□□ 0.83
Cdk5rap3Q99LM2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdk5rap3Q99LM2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdk5rap3Q99LM2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdk5rap3Q99LM2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdk5rap3Q99LM2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdk5rap3Q99LM2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
Cdk5rap3Q99LM2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdk5rap3Q99LM2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cdk5rap3Q99LM2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdk5rap3Q99LM2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.2■□□□□ 0.82
Cdk5rap3Q99LM2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.2■□□□□ 0.82
Cdk5rap3Q99LM2 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdk5rap3Q99LM2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdk5rap3Q99LM2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdk5rap3Q99LM2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdk5rap3Q99LM2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdk5rap3Q99LM2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdk5rap3Q99LM2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdk5rap3Q99LM2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.19■□□□□ 0.82
Cdk5rap3Q99LM2 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.19■□□□□ 0.82
Cdk5rap3Q99LM2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdk5rap3Q99LM2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdk5rap3Q99LM2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Cdk5rap3Q99LM2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdk5rap3Q99LM2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cdk5rap3Q99LM2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdk5rap3Q99LM2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cdk5rap3Q99LM2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cdk5rap3Q99LM2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdk5rap3Q99LM2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdk5rap3Q99LM2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdk5rap3Q99LM2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdk5rap3Q99LM2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdk5rap3Q99LM2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Cdk5rap3Q99LM2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Cdk5rap3Q99LM2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdk5rap3Q99LM2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.18■□□□□ 0.82
Cdk5rap3Q99LM2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cdk5rap3Q99LM2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.18■□□□□ 0.82
Cdk5rap3Q99LM2 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdk5rap3Q99LM2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cdk5rap3Q99LM2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cdk5rap3Q99LM2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cdk5rap3Q99LM2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cdk5rap3Q99LM2 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.17■□□□□ 0.82
Cdk5rap3Q99LM2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.17■□□□□ 0.82
Cdk5rap3Q99LM2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdk5rap3Q99LM2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdk5rap3Q99LM2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdk5rap3Q99LM2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.17■□□□□ 0.82
Cdk5rap3Q99LM2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cdk5rap3Q99LM2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdk5rap3Q99LM2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdk5rap3Q99LM2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.16■□□□□ 0.82
Cdk5rap3Q99LM2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.16■□□□□ 0.82
Cdk5rap3Q99LM2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdk5rap3Q99LM2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.15■□□□□ 0.82
Cdk5rap3Q99LM2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Cdk5rap3Q99LM2 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.15■□□□□ 0.82
Cdk5rap3Q99LM2 AA386476-201ENSMUST00000098781 1665 ntBASIC20.15■□□□□ 0.82
Cdk5rap3Q99LM2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdk5rap3Q99LM2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdk5rap3Q99LM2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.15■□□□□ 0.82
Cdk5rap3Q99LM2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdk5rap3Q99LM2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cdk5rap3Q99LM2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdk5rap3Q99LM2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdk5rap3Q99LM2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdk5rap3Q99LM2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdk5rap3Q99LM2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdk5rap3Q99LM2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Cdk5rap3Q99LM2 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.14■□□□□ 0.81
Cdk5rap3Q99LM2 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.14■□□□□ 0.81
Cdk5rap3Q99LM2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdk5rap3Q99LM2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Cdk5rap3Q99LM2 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.14■□□□□ 0.81
Cdk5rap3Q99LM2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Cdk5rap3Q99LM2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdk5rap3Q99LM2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Cdk5rap3Q99LM2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdk5rap3Q99LM2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms