Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 CT030146.1-201ENSMUST00000220919 217 ntBASIC23.2■■□□□ 1.3
Col20a1Q923P0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Col20a1Q923P0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col20a1Q923P0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col20a1Q923P0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC23.2■■□□□ 1.3
Col20a1Q923P0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Col20a1Q923P0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Col20a1Q923P0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Col20a1Q923P0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col20a1Q923P0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col20a1Q923P0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col20a1Q923P0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col20a1Q923P0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col20a1Q923P0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC23.18■■□□□ 1.3
Col20a1Q923P0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Col20a1Q923P0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col20a1Q923P0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC23.18■■□□□ 1.3
Col20a1Q923P0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col20a1Q923P0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Col20a1Q923P0 Gm29257-201ENSMUST00000186115 639 ntBASIC23.18■■□□□ 1.3
Col20a1Q923P0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC23.18■■□□□ 1.3
Col20a1Q923P0 Gm5297-201ENSMUST00000198555 1171 ntBASIC23.18■■□□□ 1.3
Col20a1Q923P0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Col20a1Q923P0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col20a1Q923P0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col20a1Q923P0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col20a1Q923P0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Col20a1Q923P0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Col20a1Q923P0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC23.17■■□□□ 1.3
Col20a1Q923P0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Col20a1Q923P0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Col20a1Q923P0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Col20a1Q923P0 Gm43909-201ENSMUST00000203443 1876 ntBASIC23.16■■□□□ 1.3
Col20a1Q923P0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col20a1Q923P0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC23.16■■□□□ 1.3
Col20a1Q923P0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC23.16■■□□□ 1.3
Col20a1Q923P0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col20a1Q923P0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col20a1Q923P0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC23.15■■□□□ 1.3
Col20a1Q923P0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Col20a1Q923P0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Col20a1Q923P0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Col20a1Q923P0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
Col20a1Q923P0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Col20a1Q923P0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC23.15■■□□□ 1.3
Col20a1Q923P0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Col20a1Q923P0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Col20a1Q923P0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC23.14■■□□□ 1.3
Col20a1Q923P0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Col20a1Q923P0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Col20a1Q923P0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Col20a1Q923P0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Col20a1Q923P0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Col20a1Q923P0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col20a1Q923P0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col20a1Q923P0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col20a1Q923P0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Col20a1Q923P0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col20a1Q923P0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Col20a1Q923P0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Col20a1Q923P0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Col20a1Q923P0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Col20a1Q923P0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Col20a1Q923P0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Col20a1Q923P0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Col20a1Q923P0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC23.12■■□□□ 1.29
Col20a1Q923P0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Col20a1Q923P0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC23.12■■□□□ 1.29
Col20a1Q923P0 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Col20a1Q923P0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Col20a1Q923P0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Col20a1Q923P0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC23.11■■□□□ 1.29
Col20a1Q923P0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col20a1Q923P0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col20a1Q923P0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col20a1Q923P0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Col20a1Q923P0 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.11■■□□□ 1.29
Col20a1Q923P0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col20a1Q923P0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC23.1■■□□□ 1.29
Col20a1Q923P0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC23.1■■□□□ 1.29
Col20a1Q923P0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Col20a1Q923P0 Ap3s1-204ENSMUST00000225520 957 ntBASIC23.1■■□□□ 1.29
Col20a1Q923P0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col20a1Q923P0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col20a1Q923P0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col20a1Q923P0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC23.1■■□□□ 1.29
Col20a1Q923P0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col20a1Q923P0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col20a1Q923P0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col20a1Q923P0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col20a1Q923P0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col20a1Q923P0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col20a1Q923P0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Col20a1Q923P0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col20a1Q923P0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col20a1Q923P0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
Col20a1Q923P0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col20a1Q923P0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col20a1Q923P0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC23.09■■□□□ 1.29
Col20a1Q923P0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms