Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx41Q91VN6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx41Q91VN6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx41Q91VN6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC22.35■■□□□ 1.17
Ddx41Q91VN6 Gm10493-201ENSMUST00000097270 612 ntBASIC22.35■■□□□ 1.17
Ddx41Q91VN6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx41Q91VN6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ddx41Q91VN6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC22.35■■□□□ 1.17
Ddx41Q91VN6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Ddx41Q91VN6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx41Q91VN6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx41Q91VN6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx41Q91VN6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx41Q91VN6 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx41Q91VN6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22.34■■□□□ 1.17
Ddx41Q91VN6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx41Q91VN6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ddx41Q91VN6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.34■■□□□ 1.17
Ddx41Q91VN6 AC122428.2-201ENSMUST00000216321 1832 ntBASIC22.34■■□□□ 1.17
Ddx41Q91VN6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Ddx41Q91VN6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx41Q91VN6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx41Q91VN6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Ddx41Q91VN6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx41Q91VN6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx41Q91VN6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Ddx41Q91VN6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ddx41Q91VN6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC22.33■■□□□ 1.17
Ddx41Q91VN6 Mir6236-201ENSMUST00000184437 123 ntBASIC22.33■■□□□ 1.17
Ddx41Q91VN6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ddx41Q91VN6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ddx41Q91VN6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx41Q91VN6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Ddx41Q91VN6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx41Q91VN6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Ddx41Q91VN6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Ddx41Q91VN6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx41Q91VN6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx41Q91VN6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx41Q91VN6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC22.32■■□□□ 1.16
Ddx41Q91VN6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx41Q91VN6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx41Q91VN6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ddx41Q91VN6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx41Q91VN6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx41Q91VN6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx41Q91VN6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx41Q91VN6 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC22.31■■□□□ 1.16
Ddx41Q91VN6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC22.31■■□□□ 1.16
Ddx41Q91VN6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Ddx41Q91VN6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
Ddx41Q91VN6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ddx41Q91VN6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC22.3■■□□□ 1.16
Ddx41Q91VN6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx41Q91VN6 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx41Q91VN6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx41Q91VN6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ddx41Q91VN6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Ddx41Q91VN6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx41Q91VN6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC22.29■■□□□ 1.16
Ddx41Q91VN6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx41Q91VN6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx41Q91VN6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC22.29■■□□□ 1.16
Ddx41Q91VN6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ddx41Q91VN6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx41Q91VN6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx41Q91VN6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx41Q91VN6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx41Q91VN6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Ddx41Q91VN6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC22.28■■□□□ 1.16
Ddx41Q91VN6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC22.28■■□□□ 1.16
Ddx41Q91VN6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx41Q91VN6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx41Q91VN6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx41Q91VN6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ddx41Q91VN6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx41Q91VN6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx41Q91VN6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC22.27■■□□□ 1.16
Ddx41Q91VN6 AC164629.5-201ENSMUST00000220387 632 ntBASIC22.27■■□□□ 1.16
Ddx41Q91VN6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Ddx41Q91VN6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx41Q91VN6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ddx41Q91VN6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC22.27■■□□□ 1.16
Ddx41Q91VN6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Ddx41Q91VN6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx41Q91VN6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx41Q91VN6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx41Q91VN6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx41Q91VN6 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx41Q91VN6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC22.26■■□□□ 1.15
Ddx41Q91VN6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx41Q91VN6 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.26■■□□□ 1.15
Ddx41Q91VN6 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ddx41Q91VN6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Ddx41Q91VN6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx41Q91VN6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx41Q91VN6 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx41Q91VN6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx41Q91VN6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ddx41Q91VN6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms