Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim60Q8VI40 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim60Q8VI40 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim60Q8VI40 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.19■□□□□ 0.82
Trim60Q8VI40 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim60Q8VI40 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim60Q8VI40 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim60Q8VI40 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim60Q8VI40 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Trim60Q8VI40 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim60Q8VI40 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim60Q8VI40 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.18■□□□□ 0.82
Trim60Q8VI40 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim60Q8VI40 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim60Q8VI40 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.18■□□□□ 0.82
Trim60Q8VI40 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Trim60Q8VI40 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim60Q8VI40 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim60Q8VI40 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Trim60Q8VI40 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim60Q8VI40 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim60Q8VI40 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim60Q8VI40 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim60Q8VI40 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim60Q8VI40 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.17■□□□□ 0.82
Trim60Q8VI40 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.17■□□□□ 0.82
Trim60Q8VI40 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.17■□□□□ 0.82
Trim60Q8VI40 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Trim60Q8VI40 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.17■□□□□ 0.82
Trim60Q8VI40 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim60Q8VI40 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim60Q8VI40 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Trim60Q8VI40 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.16■□□□□ 0.82
Trim60Q8VI40 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim60Q8VI40 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim60Q8VI40 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim60Q8VI40 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.16■□□□□ 0.82
Trim60Q8VI40 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim60Q8VI40 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim60Q8VI40 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim60Q8VI40 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim60Q8VI40 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Trim60Q8VI40 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Trim60Q8VI40 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Trim60Q8VI40 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim60Q8VI40 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim60Q8VI40 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.15■□□□□ 0.82
Trim60Q8VI40 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim60Q8VI40 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.15■□□□□ 0.82
Trim60Q8VI40 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim60Q8VI40 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim60Q8VI40 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim60Q8VI40 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Trim60Q8VI40 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim60Q8VI40 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim60Q8VI40 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim60Q8VI40 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim60Q8VI40 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim60Q8VI40 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim60Q8VI40 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim60Q8VI40 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim60Q8VI40 Gm22238-201ENSMUST00000175222 88 ntBASIC20.14■□□□□ 0.81
Trim60Q8VI40 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim60Q8VI40 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim60Q8VI40 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim60Q8VI40 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim60Q8VI40 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim60Q8VI40 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Trim60Q8VI40 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim60Q8VI40 AA386476-201ENSMUST00000098781 1665 ntBASIC20.13■□□□□ 0.81
Trim60Q8VI40 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim60Q8VI40 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.13■□□□□ 0.81
Trim60Q8VI40 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
Trim60Q8VI40 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim60Q8VI40 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim60Q8VI40 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.13■□□□□ 0.81
Trim60Q8VI40 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim60Q8VI40 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim60Q8VI40 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim60Q8VI40 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.12■□□□□ 0.81
Trim60Q8VI40 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim60Q8VI40 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.12■□□□□ 0.81
Trim60Q8VI40 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.11■□□□□ 0.81
Trim60Q8VI40 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim60Q8VI40 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.11■□□□□ 0.81
Trim60Q8VI40 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.11■□□□□ 0.81
Trim60Q8VI40 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.11■□□□□ 0.81
Trim60Q8VI40 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.11■□□□□ 0.81
Trim60Q8VI40 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.11■□□□□ 0.81
Trim60Q8VI40 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim60Q8VI40 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim60Q8VI40 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim60Q8VI40 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim60Q8VI40 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim60Q8VI40 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim60Q8VI40 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim60Q8VI40 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim60Q8VI40 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim60Q8VI40 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim60Q8VI40 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms