Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.96■□□□□ 0.95
Smg8Q8VE18 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
Smg8Q8VE18 Notumos-201ENSMUST00000151998 2659 ntBASIC20.95■□□□□ 0.94
Smg8Q8VE18 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Smg8Q8VE18 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smg8Q8VE18 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.95■□□□□ 0.94
Smg8Q8VE18 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smg8Q8VE18 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.95■□□□□ 0.94
Smg8Q8VE18 AA386476-201ENSMUST00000098781 1665 ntBASIC20.95■□□□□ 0.94
Smg8Q8VE18 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smg8Q8VE18 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smg8Q8VE18 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smg8Q8VE18 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Smg8Q8VE18 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smg8Q8VE18 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.94■□□□□ 0.94
Smg8Q8VE18 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smg8Q8VE18 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Smg8Q8VE18 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smg8Q8VE18 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smg8Q8VE18 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smg8Q8VE18 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smg8Q8VE18 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Smg8Q8VE18 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smg8Q8VE18 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.93■□□□□ 0.94
Smg8Q8VE18 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.93■□□□□ 0.94
Smg8Q8VE18 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Smg8Q8VE18 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smg8Q8VE18 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smg8Q8VE18 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smg8Q8VE18 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Smg8Q8VE18 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Smg8Q8VE18 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.92■□□□□ 0.94
Smg8Q8VE18 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.92■□□□□ 0.94
Smg8Q8VE18 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smg8Q8VE18 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smg8Q8VE18 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smg8Q8VE18 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smg8Q8VE18 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Smg8Q8VE18 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.92■□□□□ 0.94
Smg8Q8VE18 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smg8Q8VE18 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smg8Q8VE18 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smg8Q8VE18 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.91■□□□□ 0.94
Smg8Q8VE18 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.91■□□□□ 0.94
Smg8Q8VE18 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smg8Q8VE18 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smg8Q8VE18 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smg8Q8VE18 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smg8Q8VE18 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.9■□□□□ 0.94
Smg8Q8VE18 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smg8Q8VE18 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.9■□□□□ 0.94
Smg8Q8VE18 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smg8Q8VE18 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Smg8Q8VE18 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Smg8Q8VE18 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.9■□□□□ 0.94
Smg8Q8VE18 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Smg8Q8VE18 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
Smg8Q8VE18 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smg8Q8VE18 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smg8Q8VE18 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.89■□□□□ 0.93
Smg8Q8VE18 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Smg8Q8VE18 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.89■□□□□ 0.93
Smg8Q8VE18 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Smg8Q8VE18 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.89■□□□□ 0.93
Smg8Q8VE18 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smg8Q8VE18 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Smg8Q8VE18 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smg8Q8VE18 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smg8Q8VE18 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Smg8Q8VE18 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.88■□□□□ 0.93
Smg8Q8VE18 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smg8Q8VE18 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smg8Q8VE18 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Smg8Q8VE18 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smg8Q8VE18 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smg8Q8VE18 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smg8Q8VE18 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Smg8Q8VE18 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smg8Q8VE18 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smg8Q8VE18 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smg8Q8VE18 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smg8Q8VE18 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smg8Q8VE18 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smg8Q8VE18 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Smg8Q8VE18 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Smg8Q8VE18 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smg8Q8VE18 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Smg8Q8VE18 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smg8Q8VE18 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smg8Q8VE18 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.86■□□□□ 0.93
Smg8Q8VE18 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.86■□□□□ 0.93
Smg8Q8VE18 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smg8Q8VE18 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Smg8Q8VE18 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smg8Q8VE18 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smg8Q8VE18 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smg8Q8VE18 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smg8Q8VE18 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.85■□□□□ 0.93
Smg8Q8VE18 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smg8Q8VE18 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms