Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp28Q8CGV8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp28Q8CGV8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp28Q8CGV8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp28Q8CGV8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp28Q8CGV8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Mmp28Q8CGV8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.64■□□□□ 0.26
Mmp28Q8CGV8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Mmp28Q8CGV8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.64■□□□□ 0.26
Mmp28Q8CGV8 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp28Q8CGV8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp28Q8CGV8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp28Q8CGV8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.64■□□□□ 0.25
Mmp28Q8CGV8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Mmp28Q8CGV8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp28Q8CGV8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp28Q8CGV8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp28Q8CGV8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp28Q8CGV8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp28Q8CGV8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.64■□□□□ 0.25
Mmp28Q8CGV8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.64■□□□□ 0.25
Mmp28Q8CGV8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mmp28Q8CGV8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp28Q8CGV8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp28Q8CGV8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp28Q8CGV8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Mmp28Q8CGV8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Mmp28Q8CGV8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp28Q8CGV8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp28Q8CGV8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp28Q8CGV8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.63■□□□□ 0.25
Mmp28Q8CGV8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp28Q8CGV8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp28Q8CGV8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp28Q8CGV8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp28Q8CGV8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Mmp28Q8CGV8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mmp28Q8CGV8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Mmp28Q8CGV8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp28Q8CGV8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp28Q8CGV8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp28Q8CGV8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp28Q8CGV8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp28Q8CGV8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp28Q8CGV8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Mmp28Q8CGV8 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.62■□□□□ 0.25
Mmp28Q8CGV8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp28Q8CGV8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp28Q8CGV8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp28Q8CGV8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mmp28Q8CGV8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp28Q8CGV8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp28Q8CGV8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp28Q8CGV8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp28Q8CGV8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp28Q8CGV8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp28Q8CGV8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp28Q8CGV8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.61■□□□□ 0.25
Mmp28Q8CGV8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Mmp28Q8CGV8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.61■□□□□ 0.25
Mmp28Q8CGV8 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.61■□□□□ 0.25
Mmp28Q8CGV8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp28Q8CGV8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.61■□□□□ 0.25
Mmp28Q8CGV8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp28Q8CGV8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp28Q8CGV8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mmp28Q8CGV8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp28Q8CGV8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp28Q8CGV8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.6■□□□□ 0.25
Mmp28Q8CGV8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp28Q8CGV8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp28Q8CGV8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp28Q8CGV8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Mmp28Q8CGV8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp28Q8CGV8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Mmp28Q8CGV8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp28Q8CGV8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp28Q8CGV8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp28Q8CGV8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp28Q8CGV8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp28Q8CGV8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp28Q8CGV8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp28Q8CGV8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mmp28Q8CGV8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Mmp28Q8CGV8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.59■□□□□ 0.25
Mmp28Q8CGV8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Mmp28Q8CGV8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Mmp28Q8CGV8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp28Q8CGV8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp28Q8CGV8 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.58■□□□□ 0.24
Mmp28Q8CGV8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Mmp28Q8CGV8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.58■□□□□ 0.24
Mmp28Q8CGV8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Mmp28Q8CGV8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Mmp28Q8CGV8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp28Q8CGV8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp28Q8CGV8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp28Q8CGV8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Mmp28Q8CGV8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Mmp28Q8CGV8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms