Protein–RNA interactions for Protein: Q8CDN1

Uncharacterized protein C3orf20 homolog, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CDN1 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q8CDN1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q8CDN1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Q8CDN1 Reep4-203ENSMUST00000226563 1444 ntBASIC20.21■□□□□ 0.83
Q8CDN1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Q8CDN1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Q8CDN1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Q8CDN1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Q8CDN1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Q8CDN1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Q8CDN1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Q8CDN1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Q8CDN1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Q8CDN1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Q8CDN1 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.2■□□□□ 0.82
Q8CDN1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q8CDN1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Q8CDN1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.2■□□□□ 0.82
Q8CDN1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Q8CDN1 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.2■□□□□ 0.82
Q8CDN1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Q8CDN1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q8CDN1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Q8CDN1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.2■□□□□ 0.82
Q8CDN1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q8CDN1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q8CDN1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Q8CDN1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q8CDN1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Q8CDN1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Q8CDN1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q8CDN1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q8CDN1 Gm37179-201ENSMUST00000194862 823 ntBASIC20.19■□□□□ 0.82
Q8CDN1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q8CDN1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Q8CDN1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q8CDN1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q8CDN1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q8CDN1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q8CDN1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Q8CDN1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q8CDN1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q8CDN1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q8CDN1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Q8CDN1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.18■□□□□ 0.82
Q8CDN1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.18■□□□□ 0.82
Q8CDN1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.18■□□□□ 0.82
Q8CDN1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q8CDN1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q8CDN1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q8CDN1 AA386476-201ENSMUST00000098781 1665 ntBASIC20.18■□□□□ 0.82
Q8CDN1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q8CDN1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Q8CDN1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Q8CDN1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Q8CDN1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Q8CDN1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.17■□□□□ 0.82
Q8CDN1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
Q8CDN1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Q8CDN1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.17■□□□□ 0.82
Q8CDN1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.17■□□□□ 0.82
Q8CDN1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Q8CDN1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Q8CDN1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Q8CDN1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Q8CDN1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.16■□□□□ 0.82
Q8CDN1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Q8CDN1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Q8CDN1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Q8CDN1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.16■□□□□ 0.82
Q8CDN1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Q8CDN1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Q8CDN1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Q8CDN1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q8CDN1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
Q8CDN1 Notumos-201ENSMUST00000151998 2659 ntBASIC20.15■□□□□ 0.82
Q8CDN1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q8CDN1 Gm13234-201ENSMUST00000120010 747 ntBASIC20.15■□□□□ 0.82
Q8CDN1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.15■□□□□ 0.82
Q8CDN1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.15■□□□□ 0.82
Q8CDN1 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.15■□□□□ 0.82
Q8CDN1 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.15■□□□□ 0.82
Q8CDN1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q8CDN1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.15■□□□□ 0.82
Q8CDN1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Q8CDN1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q8CDN1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q8CDN1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q8CDN1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.14■□□□□ 0.82
Q8CDN1 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.14■□□□□ 0.81
Q8CDN1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q8CDN1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q8CDN1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q8CDN1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q8CDN1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q8CDN1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q8CDN1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q8CDN1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q8CDN1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Q8CDN1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms