Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.27■□□□□ 0.68
Lrif1Q8CDD9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrif1Q8CDD9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrif1Q8CDD9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrif1Q8CDD9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrif1Q8CDD9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lrif1Q8CDD9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lrif1Q8CDD9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrif1Q8CDD9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lrif1Q8CDD9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrif1Q8CDD9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrif1Q8CDD9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrif1Q8CDD9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrif1Q8CDD9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrif1Q8CDD9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.26■□□□□ 0.67
Lrif1Q8CDD9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.26■□□□□ 0.67
Lrif1Q8CDD9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.26■□□□□ 0.67
Lrif1Q8CDD9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.26■□□□□ 0.67
Lrif1Q8CDD9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrif1Q8CDD9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Lrif1Q8CDD9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrif1Q8CDD9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrif1Q8CDD9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrif1Q8CDD9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Lrif1Q8CDD9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrif1Q8CDD9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrif1Q8CDD9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrif1Q8CDD9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrif1Q8CDD9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrif1Q8CDD9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Lrif1Q8CDD9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrif1Q8CDD9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrif1Q8CDD9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.25■□□□□ 0.67
Lrif1Q8CDD9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrif1Q8CDD9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrif1Q8CDD9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lrif1Q8CDD9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrif1Q8CDD9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lrif1Q8CDD9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.24■□□□□ 0.67
Lrif1Q8CDD9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Lrif1Q8CDD9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrif1Q8CDD9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.24■□□□□ 0.67
Lrif1Q8CDD9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrif1Q8CDD9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.24■□□□□ 0.67
Lrif1Q8CDD9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lrif1Q8CDD9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lrif1Q8CDD9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Lrif1Q8CDD9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrif1Q8CDD9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrif1Q8CDD9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrif1Q8CDD9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrif1Q8CDD9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrif1Q8CDD9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.23■□□□□ 0.67
Lrif1Q8CDD9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrif1Q8CDD9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lrif1Q8CDD9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrif1Q8CDD9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrif1Q8CDD9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrif1Q8CDD9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrif1Q8CDD9 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.23■□□□□ 0.67
Lrif1Q8CDD9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrif1Q8CDD9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lrif1Q8CDD9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrif1Q8CDD9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Lrif1Q8CDD9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrif1Q8CDD9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrif1Q8CDD9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrif1Q8CDD9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrif1Q8CDD9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrif1Q8CDD9 Gm22238-201ENSMUST00000175222 88 ntBASIC19.22■□□□□ 0.67
Lrif1Q8CDD9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrif1Q8CDD9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Lrif1Q8CDD9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lrif1Q8CDD9 Rarb-207ENSMUST00000225921 2756 ntBASIC19.22■□□□□ 0.67
Lrif1Q8CDD9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lrif1Q8CDD9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrif1Q8CDD9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.21■□□□□ 0.67
Lrif1Q8CDD9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lrif1Q8CDD9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrif1Q8CDD9 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrif1Q8CDD9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lrif1Q8CDD9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrif1Q8CDD9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrif1Q8CDD9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrif1Q8CDD9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrif1Q8CDD9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrif1Q8CDD9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lrif1Q8CDD9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrif1Q8CDD9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Lrif1Q8CDD9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrif1Q8CDD9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrif1Q8CDD9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.2■□□□□ 0.66
Lrif1Q8CDD9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrif1Q8CDD9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrif1Q8CDD9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Lrif1Q8CDD9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrif1Q8CDD9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrif1Q8CDD9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrif1Q8CDD9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.2■□□□□ 0.66
Lrif1Q8CDD9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms