Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Rpap1Q80TE0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Rpap1Q80TE0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Rpap1Q80TE0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Rpap1Q80TE0 AC154266.1-201ENSMUST00000223190 503 ntBASIC30.76■■■□□ 2.51
Rpap1Q80TE0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
Rpap1Q80TE0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Rpap1Q80TE0 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC30.75■■■□□ 2.51
Rpap1Q80TE0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
Rpap1Q80TE0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC30.75■■■□□ 2.51
Rpap1Q80TE0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC30.75■■■□□ 2.51
Rpap1Q80TE0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Rpap1Q80TE0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC30.74■■■□□ 2.51
Rpap1Q80TE0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC30.74■■■□□ 2.51
Rpap1Q80TE0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Rpap1Q80TE0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Rpap1Q80TE0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC30.74■■■□□ 2.51
Rpap1Q80TE0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Rpap1Q80TE0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Rpap1Q80TE0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Rpap1Q80TE0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC30.73■■■□□ 2.51
Rpap1Q80TE0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Rpap1Q80TE0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Rpap1Q80TE0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Rpap1Q80TE0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Rpap1Q80TE0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
Rpap1Q80TE0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Rpap1Q80TE0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Rpap1Q80TE0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC30.71■■■□□ 2.51
Rpap1Q80TE0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Rpap1Q80TE0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Rpap1Q80TE0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC30.71■■■□□ 2.51
Rpap1Q80TE0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Rpap1Q80TE0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Rpap1Q80TE0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
Rpap1Q80TE0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
Rpap1Q80TE0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC30.7■■■□□ 2.5
Rpap1Q80TE0 Gm26524-201ENSMUST00000192339 390 ntBASIC30.7■■■□□ 2.5
Rpap1Q80TE0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC30.7■■■□□ 2.5
Rpap1Q80TE0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Rpap1Q80TE0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Rpap1Q80TE0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC30.69■■■□□ 2.5
Rpap1Q80TE0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
Rpap1Q80TE0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Rpap1Q80TE0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
Rpap1Q80TE0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Rpap1Q80TE0 Gm10812-201ENSMUST00000099864 546 ntBASIC30.68■■■□□ 2.5
Rpap1Q80TE0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC30.68■■■□□ 2.5
Rpap1Q80TE0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Rpap1Q80TE0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
Rpap1Q80TE0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Rpap1Q80TE0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC30.67■■■□□ 2.5
Rpap1Q80TE0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC30.67■■■□□ 2.5
Rpap1Q80TE0 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC30.67■■■□□ 2.5
Rpap1Q80TE0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC30.67■■■□□ 2.5
Rpap1Q80TE0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Rpap1Q80TE0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
Rpap1Q80TE0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Rpap1Q80TE0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
Rpap1Q80TE0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Rpap1Q80TE0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
Rpap1Q80TE0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Rpap1Q80TE0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC30.65■■■□□ 2.5
Rpap1Q80TE0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
Rpap1Q80TE0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Rpap1Q80TE0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Rpap1Q80TE0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Rpap1Q80TE0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Rpap1Q80TE0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Rpap1Q80TE0 Trmt13-210ENSMUST00000198454 880 ntBASIC30.64■■■□□ 2.5
Rpap1Q80TE0 Gm44878-201ENSMUST00000205812 1295 ntBASIC30.64■■■□□ 2.5
Rpap1Q80TE0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Rpap1Q80TE0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Rpap1Q80TE0 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC30.64■■■□□ 2.49
Rpap1Q80TE0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Rpap1Q80TE0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Rpap1Q80TE0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC30.63■■■□□ 2.49
Rpap1Q80TE0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Rpap1Q80TE0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Rpap1Q80TE0 Gm22325-201ENSMUST00000158904 308 ntBASIC30.63■■■□□ 2.49
Rpap1Q80TE0 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC30.63■■■□□ 2.49
Rpap1Q80TE0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Rpap1Q80TE0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Rpap1Q80TE0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Rpap1Q80TE0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Rpap1Q80TE0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
Rpap1Q80TE0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Rpap1Q80TE0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Rpap1Q80TE0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
Rpap1Q80TE0 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Rpap1Q80TE0 AA386476-201ENSMUST00000098781 1665 ntBASIC30.62■■■□□ 2.49
Rpap1Q80TE0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Rpap1Q80TE0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
Rpap1Q80TE0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Rpap1Q80TE0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
Rpap1Q80TE0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Rpap1Q80TE0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Rpap1Q80TE0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Rpap1Q80TE0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC30.61■■■□□ 2.49
Rpap1Q80TE0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC30.61■■■□□ 2.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms