Protein–RNA interactions for Protein: Q6P4T2

Snrnp200, U5 small nuclear ribonucleoprotein 200 kDa helicase, mousemouse

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp200Q6P4T2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Snrnp200Q6P4T2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Snrnp200Q6P4T2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Snrnp200Q6P4T2 AA386476-201ENSMUST00000098781 1665 ntBASIC18.56■□□□□ 0.56
Snrnp200Q6P4T2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Snrnp200Q6P4T2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Snrnp200Q6P4T2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Snrnp200Q6P4T2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Snrnp200Q6P4T2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Snrnp200Q6P4T2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.55■□□□□ 0.56
Snrnp200Q6P4T2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.55■□□□□ 0.56
Snrnp200Q6P4T2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Snrnp200Q6P4T2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Snrnp200Q6P4T2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Snrnp200Q6P4T2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Snrnp200Q6P4T2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Snrnp200Q6P4T2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Snrnp200Q6P4T2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Snrnp200Q6P4T2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Snrnp200Q6P4T2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.55■□□□□ 0.56
Snrnp200Q6P4T2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.55■□□□□ 0.56
Snrnp200Q6P4T2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Snrnp200Q6P4T2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Snrnp200Q6P4T2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Snrnp200Q6P4T2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Snrnp200Q6P4T2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Snrnp200Q6P4T2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Snrnp200Q6P4T2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.54■□□□□ 0.56
Snrnp200Q6P4T2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Snrnp200Q6P4T2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Snrnp200Q6P4T2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Snrnp200Q6P4T2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Snrnp200Q6P4T2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Snrnp200Q6P4T2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Snrnp200Q6P4T2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Snrnp200Q6P4T2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.53■□□□□ 0.56
Snrnp200Q6P4T2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.53■□□□□ 0.56
Snrnp200Q6P4T2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Snrnp200Q6P4T2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Snrnp200Q6P4T2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Snrnp200Q6P4T2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Snrnp200Q6P4T2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.53■□□□□ 0.56
Snrnp200Q6P4T2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Snrnp200Q6P4T2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.53■□□□□ 0.56
Snrnp200Q6P4T2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Snrnp200Q6P4T2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Snrnp200Q6P4T2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Snrnp200Q6P4T2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Snrnp200Q6P4T2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Snrnp200Q6P4T2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Snrnp200Q6P4T2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Snrnp200Q6P4T2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Snrnp200Q6P4T2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Snrnp200Q6P4T2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snrnp200Q6P4T2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Snrnp200Q6P4T2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Snrnp200Q6P4T2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.51■□□□□ 0.55
Snrnp200Q6P4T2 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.51■□□□□ 0.55
Snrnp200Q6P4T2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Snrnp200Q6P4T2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snrnp200Q6P4T2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snrnp200Q6P4T2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snrnp200Q6P4T2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Snrnp200Q6P4T2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Snrnp200Q6P4T2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Snrnp200Q6P4T2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Snrnp200Q6P4T2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Snrnp200Q6P4T2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Snrnp200Q6P4T2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Snrnp200Q6P4T2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Snrnp200Q6P4T2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
Snrnp200Q6P4T2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Snrnp200Q6P4T2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Snrnp200Q6P4T2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Snrnp200Q6P4T2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Snrnp200Q6P4T2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Snrnp200Q6P4T2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Snrnp200Q6P4T2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.49■□□□□ 0.55
Snrnp200Q6P4T2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Snrnp200Q6P4T2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.49■□□□□ 0.55
Snrnp200Q6P4T2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.49■□□□□ 0.55
Snrnp200Q6P4T2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Snrnp200Q6P4T2 Gm5874-201ENSMUST00000096101 508 ntBASIC18.49■□□□□ 0.55
Snrnp200Q6P4T2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Snrnp200Q6P4T2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Snrnp200Q6P4T2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Snrnp200Q6P4T2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Snrnp200Q6P4T2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Snrnp200Q6P4T2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Snrnp200Q6P4T2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snrnp200Q6P4T2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snrnp200Q6P4T2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snrnp200Q6P4T2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snrnp200Q6P4T2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.48■□□□□ 0.55
Snrnp200Q6P4T2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snrnp200Q6P4T2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snrnp200Q6P4T2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Snrnp200Q6P4T2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Snrnp200Q6P4T2 Gm10849-201ENSMUST00000100397 618 ntBASIC18.47■□□□□ 0.55
Snrnp200Q6P4T2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms