Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scube3Q66PY1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scube3Q66PY1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Scube3Q66PY1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
Scube3Q66PY1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scube3Q66PY1 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scube3Q66PY1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Scube3Q66PY1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Scube3Q66PY1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scube3Q66PY1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scube3Q66PY1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scube3Q66PY1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scube3Q66PY1 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.55■□□□□ 0.88
Scube3Q66PY1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Scube3Q66PY1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scube3Q66PY1 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scube3Q66PY1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.54■□□□□ 0.88
Scube3Q66PY1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scube3Q66PY1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Scube3Q66PY1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scube3Q66PY1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scube3Q66PY1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Scube3Q66PY1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scube3Q66PY1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Scube3Q66PY1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scube3Q66PY1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scube3Q66PY1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scube3Q66PY1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.53■□□□□ 0.88
Scube3Q66PY1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scube3Q66PY1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scube3Q66PY1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.53■□□□□ 0.88
Scube3Q66PY1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scube3Q66PY1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.53■□□□□ 0.88
Scube3Q66PY1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Scube3Q66PY1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scube3Q66PY1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
Scube3Q66PY1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scube3Q66PY1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.52■□□□□ 0.88
Scube3Q66PY1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scube3Q66PY1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Scube3Q66PY1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Scube3Q66PY1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scube3Q66PY1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.51■□□□□ 0.87
Scube3Q66PY1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scube3Q66PY1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scube3Q66PY1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scube3Q66PY1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scube3Q66PY1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.51■□□□□ 0.87
Scube3Q66PY1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scube3Q66PY1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.51■□□□□ 0.87
Scube3Q66PY1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scube3Q66PY1 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.51■□□□□ 0.87
Scube3Q66PY1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scube3Q66PY1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scube3Q66PY1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scube3Q66PY1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scube3Q66PY1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scube3Q66PY1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scube3Q66PY1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scube3Q66PY1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scube3Q66PY1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scube3Q66PY1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scube3Q66PY1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.5■□□□□ 0.87
Scube3Q66PY1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.5■□□□□ 0.87
Scube3Q66PY1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.5■□□□□ 0.87
Scube3Q66PY1 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.5■□□□□ 0.87
Scube3Q66PY1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scube3Q66PY1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Scube3Q66PY1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scube3Q66PY1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scube3Q66PY1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scube3Q66PY1 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.49■□□□□ 0.87
Scube3Q66PY1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scube3Q66PY1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.49■□□□□ 0.87
Scube3Q66PY1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scube3Q66PY1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.49■□□□□ 0.87
Scube3Q66PY1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scube3Q66PY1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scube3Q66PY1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scube3Q66PY1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Scube3Q66PY1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scube3Q66PY1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Scube3Q66PY1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scube3Q66PY1 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scube3Q66PY1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scube3Q66PY1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.48■□□□□ 0.87
Scube3Q66PY1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
Scube3Q66PY1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scube3Q66PY1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Scube3Q66PY1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scube3Q66PY1 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.47■□□□□ 0.87
Scube3Q66PY1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scube3Q66PY1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scube3Q66PY1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scube3Q66PY1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Scube3Q66PY1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scube3Q66PY1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Scube3Q66PY1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Scube3Q66PY1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scube3Q66PY1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms