Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col10a1Q05306 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col10a1Q05306 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col10a1Q05306 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col10a1Q05306 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Col10a1Q05306 Gm43017-201ENSMUST00000198296 752 ntBASIC18.02■□□□□ 0.48
Col10a1Q05306 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.02■□□□□ 0.48
Col10a1Q05306 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col10a1Q05306 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col10a1Q05306 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col10a1Q05306 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col10a1Q05306 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Col10a1Q05306 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col10a1Q05306 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Col10a1Q05306 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col10a1Q05306 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.01■□□□□ 0.47
Col10a1Q05306 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.01■□□□□ 0.47
Col10a1Q05306 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.01■□□□□ 0.47
Col10a1Q05306 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.01■□□□□ 0.47
Col10a1Q05306 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Col10a1Q05306 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col10a1Q05306 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col10a1Q05306 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Col10a1Q05306 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col10a1Q05306 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col10a1Q05306 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col10a1Q05306 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col10a1Q05306 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col10a1Q05306 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col10a1Q05306 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18■□□□□ 0.47
Col10a1Q05306 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col10a1Q05306 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col10a1Q05306 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Col10a1Q05306 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col10a1Q05306 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col10a1Q05306 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Col10a1Q05306 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col10a1Q05306 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Col10a1Q05306 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Col10a1Q05306 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col10a1Q05306 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col10a1Q05306 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Col10a1Q05306 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Col10a1Q05306 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col10a1Q05306 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col10a1Q05306 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col10a1Q05306 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col10a1Q05306 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col10a1Q05306 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.99■□□□□ 0.47
Col10a1Q05306 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
Col10a1Q05306 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Col10a1Q05306 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col10a1Q05306 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Col10a1Q05306 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.99■□□□□ 0.47
Col10a1Q05306 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.99■□□□□ 0.47
Col10a1Q05306 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col10a1Q05306 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Col10a1Q05306 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col10a1Q05306 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.98■□□□□ 0.47
Col10a1Q05306 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Col10a1Q05306 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col10a1Q05306 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Col10a1Q05306 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col10a1Q05306 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col10a1Q05306 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col10a1Q05306 AA386476-201ENSMUST00000098781 1665 ntBASIC17.97■□□□□ 0.47
Col10a1Q05306 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col10a1Q05306 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col10a1Q05306 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.97■□□□□ 0.47
Col10a1Q05306 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.97■□□□□ 0.47
Col10a1Q05306 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col10a1Q05306 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col10a1Q05306 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.97■□□□□ 0.47
Col10a1Q05306 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Col10a1Q05306 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col10a1Q05306 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.97■□□□□ 0.47
Col10a1Q05306 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Col10a1Q05306 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col10a1Q05306 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Col10a1Q05306 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.96■□□□□ 0.47
Col10a1Q05306 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col10a1Q05306 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.96■□□□□ 0.47
Col10a1Q05306 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col10a1Q05306 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col10a1Q05306 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Col10a1Q05306 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col10a1Q05306 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col10a1Q05306 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col10a1Q05306 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.95■□□□□ 0.46
Col10a1Q05306 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col10a1Q05306 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col10a1Q05306 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col10a1Q05306 Smad6-203ENSMUST00000179458 273 ntBASIC17.95■□□□□ 0.46
Col10a1Q05306 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col10a1Q05306 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Col10a1Q05306 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Col10a1Q05306 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col10a1Q05306 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col10a1Q05306 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col10a1Q05306 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms