Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cd27P41272 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.71■□□□□ 0.11
Cd27P41272 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cd27P41272 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Cd27P41272 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cd27P41272 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.71■□□□□ 0.11
Cd27P41272 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cd27P41272 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd27P41272 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd27P41272 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cd27P41272 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Cd27P41272 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.7■□□□□ 0.1
Cd27P41272 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd27P41272 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cd27P41272 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cd27P41272 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd27P41272 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cd27P41272 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cd27P41272 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cd27P41272 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC15.69■□□□□ 0.1
Cd27P41272 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Cd27P41272 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC15.69■□□□□ 0.1
Cd27P41272 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd27P41272 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd27P41272 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd27P41272 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd27P41272 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cd27P41272 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd27P41272 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cd27P41272 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cd27P41272 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd27P41272 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.68■□□□□ 0.1
Cd27P41272 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd27P41272 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Cd27P41272 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd27P41272 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd27P41272 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd27P41272 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cd27P41272 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd27P41272 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.68■□□□□ 0.1
Cd27P41272 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.68■□□□□ 0.1
Cd27P41272 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd27P41272 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cd27P41272 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd27P41272 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cd27P41272 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd27P41272 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cd27P41272 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd27P41272 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd27P41272 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd27P41272 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cd27P41272 Gm40848-201ENSMUST00000221998 324 ntBASIC15.67■□□□□ 0.1
Cd27P41272 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.67■□□□□ 0.1
Cd27P41272 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd27P41272 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cd27P41272 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cd27P41272 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Cd27P41272 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cd27P41272 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cd27P41272 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cd27P41272 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Cd27P41272 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cd27P41272 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd27P41272 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cd27P41272 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cd27P41272 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Cd27P41272 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd27P41272 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.66■□□□□ 0.1
Cd27P41272 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd27P41272 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd27P41272 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd27P41272 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cd27P41272 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cd27P41272 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cd27P41272 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.65■□□□□ 0.1
Cd27P41272 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd27P41272 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd27P41272 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd27P41272 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd27P41272 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd27P41272 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.65■□□□□ 0.1
Cd27P41272 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cd27P41272 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd27P41272 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.65■□□□□ 0.1
Cd27P41272 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cd27P41272 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd27P41272 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cd27P41272 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cd27P41272 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd27P41272 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd27P41272 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd27P41272 Gm26833-201ENSMUST00000180899 440 ntBASIC15.64■□□□□ 0.09
Cd27P41272 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cd27P41272 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd27P41272 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd27P41272 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd27P41272 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cd27P41272 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd27P41272 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cd27P41272 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms