Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RetP35546 Gm10493-201ENSMUST00000097270 612 ntBASIC18.29■□□□□ 0.52
RetP35546 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RetP35546 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RetP35546 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RetP35546 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.28■□□□□ 0.52
RetP35546 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RetP35546 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RetP35546 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RetP35546 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RetP35546 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RetP35546 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.28■□□□□ 0.52
RetP35546 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RetP35546 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.28■□□□□ 0.52
RetP35546 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.27■□□□□ 0.52
RetP35546 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RetP35546 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RetP35546 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RetP35546 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.27■□□□□ 0.52
RetP35546 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RetP35546 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RetP35546 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RetP35546 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.27■□□□□ 0.52
RetP35546 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RetP35546 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RetP35546 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.27■□□□□ 0.52
RetP35546 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RetP35546 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RetP35546 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
RetP35546 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RetP35546 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RetP35546 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RetP35546 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RetP35546 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RetP35546 Gm12251-201ENSMUST00000117893 792 ntBASIC18.26■□□□□ 0.51
RetP35546 Gm43060-201ENSMUST00000200621 289 ntBASIC18.26■□□□□ 0.51
RetP35546 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RetP35546 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RetP35546 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RetP35546 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RetP35546 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RetP35546 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RetP35546 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RetP35546 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RetP35546 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.25■□□□□ 0.51
RetP35546 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RetP35546 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.25■□□□□ 0.51
RetP35546 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RetP35546 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.25■□□□□ 0.51
RetP35546 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RetP35546 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RetP35546 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RetP35546 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RetP35546 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RetP35546 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RetP35546 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RetP35546 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RetP35546 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RetP35546 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RetP35546 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RetP35546 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RetP35546 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RetP35546 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RetP35546 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
RetP35546 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.24■□□□□ 0.51
RetP35546 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RetP35546 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RetP35546 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RetP35546 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.24■□□□□ 0.51
RetP35546 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RetP35546 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RetP35546 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RetP35546 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RetP35546 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RetP35546 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RetP35546 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RetP35546 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.23■□□□□ 0.51
RetP35546 Gm26571-201ENSMUST00000181399 666 ntBASIC18.23■□□□□ 0.51
RetP35546 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RetP35546 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.23■□□□□ 0.51
RetP35546 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RetP35546 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RetP35546 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RetP35546 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RetP35546 Gm42642-201ENSMUST00000200683 355 ntBASIC18.22■□□□□ 0.51
RetP35546 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RetP35546 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RetP35546 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RetP35546 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RetP35546 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RetP35546 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RetP35546 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RetP35546 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RetP35546 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RetP35546 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RetP35546 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RetP35546 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.21■□□□□ 0.51
RetP35546 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RetP35546 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RetP35546 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms