Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Dkk1O54908 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dkk1O54908 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dkk1O54908 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dkk1O54908 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Dkk1O54908 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Dkk1O54908 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dkk1O54908 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Dkk1O54908 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Dkk1O54908 Gm6991-201ENSMUST00000218475 1178 ntBASIC16.95■□□□□ 0.3
Dkk1O54908 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.95■□□□□ 0.3
Dkk1O54908 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dkk1O54908 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dkk1O54908 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Dkk1O54908 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dkk1O54908 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dkk1O54908 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Dkk1O54908 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.94■□□□□ 0.3
Dkk1O54908 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dkk1O54908 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dkk1O54908 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dkk1O54908 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Dkk1O54908 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Dkk1O54908 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dkk1O54908 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Dkk1O54908 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dkk1O54908 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Dkk1O54908 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Dkk1O54908 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Dkk1O54908 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Dkk1O54908 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Dkk1O54908 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Dkk1O54908 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Dkk1O54908 Gm36943-201ENSMUST00000194422 282 ntBASIC16.93■□□□□ 0.3
Dkk1O54908 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Dkk1O54908 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Dkk1O54908 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Dkk1O54908 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Dkk1O54908 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Dkk1O54908 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Dkk1O54908 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.93■□□□□ 0.3
Dkk1O54908 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Dkk1O54908 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Dkk1O54908 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Dkk1O54908 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.92■□□□□ 0.3
Dkk1O54908 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.92■□□□□ 0.3
Dkk1O54908 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.92■□□□□ 0.3
Dkk1O54908 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.92■□□□□ 0.3
Dkk1O54908 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Dkk1O54908 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Dkk1O54908 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Dkk1O54908 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Dkk1O54908 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Dkk1O54908 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Dkk1O54908 Gm8493-201ENSMUST00000196881 489 ntBASIC16.91■□□□□ 0.3
Dkk1O54908 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Dkk1O54908 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Dkk1O54908 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
Dkk1O54908 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Dkk1O54908 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Dkk1O54908 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Dkk1O54908 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Dkk1O54908 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Dkk1O54908 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Dkk1O54908 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Dkk1O54908 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Dkk1O54908 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.9■□□□□ 0.3
Dkk1O54908 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.9■□□□□ 0.3
Dkk1O54908 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.9■□□□□ 0.3
Dkk1O54908 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Dkk1O54908 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.9■□□□□ 0.3
Dkk1O54908 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Dkk1O54908 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Dkk1O54908 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Dkk1O54908 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Dkk1O54908 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
Dkk1O54908 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Dkk1O54908 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Dkk1O54908 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Dkk1O54908 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
Dkk1O54908 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Dkk1O54908 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Dkk1O54908 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Dkk1O54908 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dkk1O54908 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dkk1O54908 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dkk1O54908 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Dkk1O54908 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.88■□□□□ 0.29
Dkk1O54908 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dkk1O54908 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Dkk1O54908 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dkk1O54908 Gm12439-201ENSMUST00000117162 365 ntBASIC16.88■□□□□ 0.29
Dkk1O54908 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Dkk1O54908 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dkk1O54908 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Dkk1O54908 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dkk1O54908 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Dkk1O54908 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dkk1O54908 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Dkk1O54908 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms