Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gm11236J3QMS7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gm11236J3QMS7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Gm11236J3QMS7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gm11236J3QMS7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm11236J3QMS7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm11236J3QMS7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm11236J3QMS7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
Gm11236J3QMS7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm11236J3QMS7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Gm11236J3QMS7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gm11236J3QMS7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm11236J3QMS7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm11236J3QMS7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Gm11236J3QMS7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Gm11236J3QMS7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gm11236J3QMS7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm11236J3QMS7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Gm11236J3QMS7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.58■□□□□ 0.89
Gm11236J3QMS7 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm11236J3QMS7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm11236J3QMS7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Gm11236J3QMS7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm11236J3QMS7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm11236J3QMS7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Gm11236J3QMS7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Gm11236J3QMS7 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gm11236J3QMS7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Gm11236J3QMS7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.57■□□□□ 0.88
Gm11236J3QMS7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.57■□□□□ 0.88
Gm11236J3QMS7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm11236J3QMS7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm11236J3QMS7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm11236J3QMS7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm11236J3QMS7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm11236J3QMS7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm11236J3QMS7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm11236J3QMS7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.57■□□□□ 0.88
Gm11236J3QMS7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gm11236J3QMS7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm11236J3QMS7 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.56■□□□□ 0.88
Gm11236J3QMS7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.56■□□□□ 0.88
Gm11236J3QMS7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gm11236J3QMS7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.56■□□□□ 0.88
Gm11236J3QMS7 Gm7290-201ENSMUST00000104990 617 ntBASIC20.56■□□□□ 0.88
Gm11236J3QMS7 Gm12918-201ENSMUST00000120234 636 ntBASIC20.56■□□□□ 0.88
Gm11236J3QMS7 Gm13534-201ENSMUST00000121169 513 ntBASIC20.56■□□□□ 0.88
Gm11236J3QMS7 Gm15710-201ENSMUST00000121821 636 ntBASIC20.56■□□□□ 0.88
Gm11236J3QMS7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm11236J3QMS7 Gm5075-201ENSMUST00000196916 622 ntBASIC20.56■□□□□ 0.88
Gm11236J3QMS7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.56■□□□□ 0.88
Gm11236J3QMS7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.56■□□□□ 0.88
Gm11236J3QMS7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm11236J3QMS7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.55■□□□□ 0.88
Gm11236J3QMS7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm11236J3QMS7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Gm11236J3QMS7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm11236J3QMS7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
Gm11236J3QMS7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm11236J3QMS7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gm11236J3QMS7 Gm12441-201ENSMUST00000121806 588 ntBASIC20.55■□□□□ 0.88
Gm11236J3QMS7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gm11236J3QMS7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.55■□□□□ 0.88
Gm11236J3QMS7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Gm11236J3QMS7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Gm11236J3QMS7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm11236J3QMS7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm11236J3QMS7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm11236J3QMS7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm11236J3QMS7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm11236J3QMS7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm11236J3QMS7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm11236J3QMS7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm11236J3QMS7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm11236J3QMS7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm11236J3QMS7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.54■□□□□ 0.88
Gm11236J3QMS7 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.54■□□□□ 0.88
Gm11236J3QMS7 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm11236J3QMS7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm11236J3QMS7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm11236J3QMS7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.54■□□□□ 0.88
Gm11236J3QMS7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm11236J3QMS7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm11236J3QMS7 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.53■□□□□ 0.88
Gm11236J3QMS7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Gm11236J3QMS7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Gm11236J3QMS7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Gm11236J3QMS7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.53■□□□□ 0.88
Gm11236J3QMS7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm11236J3QMS7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm11236J3QMS7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm11236J3QMS7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.53■□□□□ 0.88
Gm11236J3QMS7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm11236J3QMS7 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.53■□□□□ 0.88
Gm11236J3QMS7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm11236J3QMS7 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.53■□□□□ 0.88
Gm11236J3QMS7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.53■□□□□ 0.88
Gm11236J3QMS7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm11236J3QMS7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm11236J3QMS7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms