Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav17A0A075B655 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.52■□□□□ 0.08
Trav17A0A075B655 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav17A0A075B655 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav17A0A075B655 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav17A0A075B655 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav17A0A075B655 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav17A0A075B655 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav17A0A075B655 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav17A0A075B655 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav17A0A075B655 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav17A0A075B655 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.51■□□□□ 0.07
Trav17A0A075B655 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav17A0A075B655 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav17A0A075B655 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.51■□□□□ 0.07
Trav17A0A075B655 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav17A0A075B655 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav17A0A075B655 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav17A0A075B655 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav17A0A075B655 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Trav17A0A075B655 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav17A0A075B655 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav17A0A075B655 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav17A0A075B655 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav17A0A075B655 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav17A0A075B655 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav17A0A075B655 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav17A0A075B655 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav17A0A075B655 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav17A0A075B655 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Trav17A0A075B655 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav17A0A075B655 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav17A0A075B655 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav17A0A075B655 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav17A0A075B655 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav17A0A075B655 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav17A0A075B655 Gm43566-201ENSMUST00000196851 808 ntBASIC15.49■□□□□ 0.07
Trav17A0A075B655 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trav17A0A075B655 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav17A0A075B655 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav17A0A075B655 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav17A0A075B655 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav17A0A075B655 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav17A0A075B655 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav17A0A075B655 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav17A0A075B655 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav17A0A075B655 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav17A0A075B655 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav17A0A075B655 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav17A0A075B655 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav17A0A075B655 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav17A0A075B655 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.48■□□□□ 0.07
Trav17A0A075B655 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.48■□□□□ 0.07
Trav17A0A075B655 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav17A0A075B655 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav17A0A075B655 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav17A0A075B655 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav17A0A075B655 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav17A0A075B655 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav17A0A075B655 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav17A0A075B655 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav17A0A075B655 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav17A0A075B655 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav17A0A075B655 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav17A0A075B655 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav17A0A075B655 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav17A0A075B655 Golph3-205ENSMUST00000228671 2842 ntBASIC15.47■□□□□ 0.07
Trav17A0A075B655 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.47■□□□□ 0.07
Trav17A0A075B655 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav17A0A075B655 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav17A0A075B655 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav17A0A075B655 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav17A0A075B655 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav17A0A075B655 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav17A0A075B655 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav17A0A075B655 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav17A0A075B655 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav17A0A075B655 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trav17A0A075B655 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav17A0A075B655 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav17A0A075B655 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav17A0A075B655 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav17A0A075B655 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav17A0A075B655 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav17A0A075B655 Gm10232-201ENSMUST00000089221 720 ntBASIC15.46■□□□□ 0.07
Trav17A0A075B655 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav17A0A075B655 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav17A0A075B655 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Trav17A0A075B655 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav17A0A075B655 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav17A0A075B655 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trav17A0A075B655 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav17A0A075B655 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Trav17A0A075B655 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.45■□□□□ 0.06
Trav17A0A075B655 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav17A0A075B655 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav17A0A075B655 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav17A0A075B655 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav17A0A075B655 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav17A0A075B655 Gm13238-201ENSMUST00000117655 780 ntBASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms