Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.97■□□□□ 0.47
Trav8n-2A0A075B633 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav8n-2A0A075B633 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav8n-2A0A075B633 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav8n-2A0A075B633 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.96■□□□□ 0.47
Trav8n-2A0A075B633 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav8n-2A0A075B633 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav8n-2A0A075B633 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.96■□□□□ 0.47
Trav8n-2A0A075B633 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.96■□□□□ 0.47
Trav8n-2A0A075B633 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav8n-2A0A075B633 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav8n-2A0A075B633 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav8n-2A0A075B633 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav8n-2A0A075B633 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav8n-2A0A075B633 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav8n-2A0A075B633 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.95■□□□□ 0.46
Trav8n-2A0A075B633 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Trav8n-2A0A075B633 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.95■□□□□ 0.46
Trav8n-2A0A075B633 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav8n-2A0A075B633 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav8n-2A0A075B633 Gm6365-201ENSMUST00000054711 744 ntBASIC17.95■□□□□ 0.46
Trav8n-2A0A075B633 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav8n-2A0A075B633 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav8n-2A0A075B633 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav8n-2A0A075B633 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav8n-2A0A075B633 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav8n-2A0A075B633 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav8n-2A0A075B633 Gm22240-201ENSMUST00000175225 82 ntBASIC17.94■□□□□ 0.46
Trav8n-2A0A075B633 Gm8520-201ENSMUST00000186517 868 ntBASIC17.94■□□□□ 0.46
Trav8n-2A0A075B633 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.94■□□□□ 0.46
Trav8n-2A0A075B633 Gm38205-201ENSMUST00000192243 258 ntBASIC17.94■□□□□ 0.46
Trav8n-2A0A075B633 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.94■□□□□ 0.46
Trav8n-2A0A075B633 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav8n-2A0A075B633 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav8n-2A0A075B633 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trav8n-2A0A075B633 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8n-2A0A075B633 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.93■□□□□ 0.46
Trav8n-2A0A075B633 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8n-2A0A075B633 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.93■□□□□ 0.46
Trav8n-2A0A075B633 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8n-2A0A075B633 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8n-2A0A075B633 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8n-2A0A075B633 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Trav8n-2A0A075B633 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trav8n-2A0A075B633 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav8n-2A0A075B633 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav8n-2A0A075B633 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trav8n-2A0A075B633 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav8n-2A0A075B633 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav8n-2A0A075B633 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav8n-2A0A075B633 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trav8n-2A0A075B633 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav8n-2A0A075B633 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trav8n-2A0A075B633 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav8n-2A0A075B633 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav8n-2A0A075B633 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trav8n-2A0A075B633 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav8n-2A0A075B633 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav8n-2A0A075B633 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav8n-2A0A075B633 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav8n-2A0A075B633 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Trav8n-2A0A075B633 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trav8n-2A0A075B633 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Trav8n-2A0A075B633 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav8n-2A0A075B633 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Trav8n-2A0A075B633 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav8n-2A0A075B633 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav8n-2A0A075B633 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8n-2A0A075B633 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8n-2A0A075B633 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8n-2A0A075B633 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Trav8n-2A0A075B633 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav8n-2A0A075B633 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trav8n-2A0A075B633 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Trav8n-2A0A075B633 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.9■□□□□ 0.46
Trav8n-2A0A075B633 Gm6420-201ENSMUST00000193885 723 ntBASIC17.9■□□□□ 0.46
Trav8n-2A0A075B633 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.89■□□□□ 0.46
Trav8n-2A0A075B633 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Trav8n-2A0A075B633 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav8n-2A0A075B633 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.89■□□□□ 0.45
Trav8n-2A0A075B633 Gm13148-201ENSMUST00000118892 745 ntBASIC17.89■□□□□ 0.45
Trav8n-2A0A075B633 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav8n-2A0A075B633 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav8n-2A0A075B633 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav8n-2A0A075B633 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trav8n-2A0A075B633 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.89■□□□□ 0.45
Trav8n-2A0A075B633 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav8n-2A0A075B633 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav8n-2A0A075B633 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav8n-2A0A075B633 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav8n-2A0A075B633 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trav8n-2A0A075B633 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.88■□□□□ 0.45
Trav8n-2A0A075B633 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.88■□□□□ 0.45
Trav8n-2A0A075B633 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.88■□□□□ 0.45
Trav8n-2A0A075B633 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav8n-2A0A075B633 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav8n-2A0A075B633 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.88■□□□□ 0.45
Trav8n-2A0A075B633 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav8n-2A0A075B633 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
Trav8n-2A0A075B633 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms