Protein–RNA interactions for Protein: Q9D287

Bcas2, Pre-mRNA-splicing factor SPF27, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bcas2Q9D287 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Bcas2Q9D287 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Bcas2Q9D287 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.97■□□□□ 0.63
Bcas2Q9D287 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Bcas2Q9D287 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Bcas2Q9D287 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Bcas2Q9D287 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Bcas2Q9D287 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.97■□□□□ 0.63
Bcas2Q9D287 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Bcas2Q9D287 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Bcas2Q9D287 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Bcas2Q9D287 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Bcas2Q9D287 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Bcas2Q9D287 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Bcas2Q9D287 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Bcas2Q9D287 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Bcas2Q9D287 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Bcas2Q9D287 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Bcas2Q9D287 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Bcas2Q9D287 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Bcas2Q9D287 Gm22238-201ENSMUST00000175222 88 ntBASIC18.96■□□□□ 0.63
Bcas2Q9D287 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Bcas2Q9D287 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Bcas2Q9D287 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Bcas2Q9D287 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Bcas2Q9D287 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Bcas2Q9D287 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Bcas2Q9D287 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.96■□□□□ 0.63
Bcas2Q9D287 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Bcas2Q9D287 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Bcas2Q9D287 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Bcas2Q9D287 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Bcas2Q9D287 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Bcas2Q9D287 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Bcas2Q9D287 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.95■□□□□ 0.62
Bcas2Q9D287 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.95■□□□□ 0.62
Bcas2Q9D287 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
Bcas2Q9D287 Gm9870-201ENSMUST00000063874 645 ntBASIC18.95■□□□□ 0.62
Bcas2Q9D287 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Bcas2Q9D287 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Bcas2Q9D287 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Bcas2Q9D287 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Bcas2Q9D287 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Bcas2Q9D287 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Bcas2Q9D287 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Bcas2Q9D287 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Bcas2Q9D287 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.94■□□□□ 0.62
Bcas2Q9D287 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Bcas2Q9D287 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Bcas2Q9D287 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Bcas2Q9D287 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Bcas2Q9D287 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.93■□□□□ 0.62
Bcas2Q9D287 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Bcas2Q9D287 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Bcas2Q9D287 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Bcas2Q9D287 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.93■□□□□ 0.62
Bcas2Q9D287 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Bcas2Q9D287 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Bcas2Q9D287 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Bcas2Q9D287 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.93■□□□□ 0.62
Bcas2Q9D287 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Bcas2Q9D287 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Bcas2Q9D287 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Bcas2Q9D287 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Bcas2Q9D287 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Bcas2Q9D287 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Bcas2Q9D287 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.92■□□□□ 0.62
Bcas2Q9D287 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Bcas2Q9D287 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Bcas2Q9D287 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Bcas2Q9D287 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Bcas2Q9D287 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Bcas2Q9D287 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Bcas2Q9D287 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Bcas2Q9D287 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Bcas2Q9D287 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Bcas2Q9D287 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Bcas2Q9D287 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Bcas2Q9D287 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Bcas2Q9D287 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Bcas2Q9D287 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Bcas2Q9D287 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Bcas2Q9D287 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Bcas2Q9D287 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Bcas2Q9D287 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Bcas2Q9D287 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Bcas2Q9D287 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Bcas2Q9D287 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Bcas2Q9D287 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Bcas2Q9D287 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Bcas2Q9D287 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Bcas2Q9D287 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Bcas2Q9D287 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.89■□□□□ 0.61
Bcas2Q9D287 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Bcas2Q9D287 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Bcas2Q9D287 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Bcas2Q9D287 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.88■□□□□ 0.61
Bcas2Q9D287 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Bcas2Q9D287 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Bcas2Q9D287 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms