Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.52■□□□□ 0.56
Rnf138Q9CQE0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf138Q9CQE0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf138Q9CQE0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf138Q9CQE0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf138Q9CQE0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.52■□□□□ 0.56
Rnf138Q9CQE0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf138Q9CQE0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf138Q9CQE0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf138Q9CQE0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf138Q9CQE0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf138Q9CQE0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf138Q9CQE0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf138Q9CQE0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf138Q9CQE0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf138Q9CQE0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rnf138Q9CQE0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf138Q9CQE0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf138Q9CQE0 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.51■□□□□ 0.55
Rnf138Q9CQE0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Rnf138Q9CQE0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf138Q9CQE0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf138Q9CQE0 Gm27405-201ENSMUST00000184201 112 ntBASIC18.5■□□□□ 0.55
Rnf138Q9CQE0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf138Q9CQE0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf138Q9CQE0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf138Q9CQE0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf138Q9CQE0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf138Q9CQE0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf138Q9CQE0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rnf138Q9CQE0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf138Q9CQE0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf138Q9CQE0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.49■□□□□ 0.55
Rnf138Q9CQE0 Reep4-203ENSMUST00000226563 1444 ntBASIC18.49■□□□□ 0.55
Rnf138Q9CQE0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rnf138Q9CQE0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rnf138Q9CQE0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.48■□□□□ 0.55
Rnf138Q9CQE0 Gm13234-201ENSMUST00000120010 747 ntBASIC18.48■□□□□ 0.55
Rnf138Q9CQE0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf138Q9CQE0 Gm7291-201ENSMUST00000199147 382 ntBASIC18.48■□□□□ 0.55
Rnf138Q9CQE0 AV356131-201ENSMUST00000206201 750 ntBASIC18.48■□□□□ 0.55
Rnf138Q9CQE0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf138Q9CQE0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rnf138Q9CQE0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf138Q9CQE0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf138Q9CQE0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Rnf138Q9CQE0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rnf138Q9CQE0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf138Q9CQE0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf138Q9CQE0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.47■□□□□ 0.55
Rnf138Q9CQE0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf138Q9CQE0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.47■□□□□ 0.55
Rnf138Q9CQE0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.47■□□□□ 0.55
Rnf138Q9CQE0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.47■□□□□ 0.55
Rnf138Q9CQE0 Gm42569-201ENSMUST00000200539 472 ntBASIC18.47■□□□□ 0.55
Rnf138Q9CQE0 Gm18671-201ENSMUST00000214826 683 ntBASIC18.47■□□□□ 0.55
Rnf138Q9CQE0 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.47■□□□□ 0.55
Rnf138Q9CQE0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf138Q9CQE0 Gm9988-201ENSMUST00000069786 435 ntBASIC18.47■□□□□ 0.55
Rnf138Q9CQE0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf138Q9CQE0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.47■□□□□ 0.55
Rnf138Q9CQE0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rnf138Q9CQE0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf138Q9CQE0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf138Q9CQE0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Rnf138Q9CQE0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf138Q9CQE0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf138Q9CQE0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf138Q9CQE0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf138Q9CQE0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf138Q9CQE0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.46■□□□□ 0.55
Rnf138Q9CQE0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf138Q9CQE0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf138Q9CQE0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf138Q9CQE0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf138Q9CQE0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.46■□□□□ 0.54
Rnf138Q9CQE0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
Rnf138Q9CQE0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Rnf138Q9CQE0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf138Q9CQE0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
Rnf138Q9CQE0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.45■□□□□ 0.54
Rnf138Q9CQE0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf138Q9CQE0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.45■□□□□ 0.54
Rnf138Q9CQE0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf138Q9CQE0 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.45■□□□□ 0.54
Rnf138Q9CQE0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf138Q9CQE0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf138Q9CQE0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf138Q9CQE0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf138Q9CQE0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.44■□□□□ 0.54
Rnf138Q9CQE0 Gm42778-201ENSMUST00000199644 553 ntBASIC18.44■□□□□ 0.54
Rnf138Q9CQE0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf138Q9CQE0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf138Q9CQE0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Rnf138Q9CQE0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.44■□□□□ 0.54
Rnf138Q9CQE0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf138Q9CQE0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf138Q9CQE0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf138Q9CQE0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rnf138Q9CQE0 Gm13146-201ENSMUST00000118508 780 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms