Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC23.31■■□□□ 1.32
Col20a1Q923P0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Col20a1Q923P0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Col20a1Q923P0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Col20a1Q923P0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col20a1Q923P0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col20a1Q923P0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC23.3■■□□□ 1.32
Col20a1Q923P0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC23.3■■□□□ 1.32
Col20a1Q923P0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col20a1Q923P0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Col20a1Q923P0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC23.3■■□□□ 1.32
Col20a1Q923P0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col20a1Q923P0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col20a1Q923P0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col20a1Q923P0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
Col20a1Q923P0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col20a1Q923P0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col20a1Q923P0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col20a1Q923P0 Gm13234-201ENSMUST00000120010 747 ntBASIC23.29■■□□□ 1.32
Col20a1Q923P0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col20a1Q923P0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC23.29■■□□□ 1.32
Col20a1Q923P0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC23.29■■□□□ 1.32
Col20a1Q923P0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.28■■□□□ 1.32
Col20a1Q923P0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Col20a1Q923P0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Col20a1Q923P0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col20a1Q923P0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Col20a1Q923P0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Col20a1Q923P0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col20a1Q923P0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col20a1Q923P0 Gm42911-201ENSMUST00000199360 1630 ntBASIC23.28■■□□□ 1.32
Col20a1Q923P0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.28■■□□□ 1.32
Col20a1Q923P0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Col20a1Q923P0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col20a1Q923P0 Reep4-203ENSMUST00000226563 1444 ntBASIC23.27■■□□□ 1.32
Col20a1Q923P0 AA386476-201ENSMUST00000098781 1665 ntBASIC23.27■■□□□ 1.32
Col20a1Q923P0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Col20a1Q923P0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col20a1Q923P0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col20a1Q923P0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC23.27■■□□□ 1.32
Col20a1Q923P0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC23.27■■□□□ 1.32
Col20a1Q923P0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC23.27■■□□□ 1.32
Col20a1Q923P0 AC154266.1-201ENSMUST00000223190 503 ntBASIC23.27■■□□□ 1.32
Col20a1Q923P0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Col20a1Q923P0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Col20a1Q923P0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col20a1Q923P0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col20a1Q923P0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col20a1Q923P0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col20a1Q923P0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col20a1Q923P0 Gm37179-201ENSMUST00000194862 823 ntBASIC23.26■■□□□ 1.31
Col20a1Q923P0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Col20a1Q923P0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col20a1Q923P0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Col20a1Q923P0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Col20a1Q923P0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col20a1Q923P0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Col20a1Q923P0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Col20a1Q923P0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col20a1Q923P0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col20a1Q923P0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC23.25■■□□□ 1.31
Col20a1Q923P0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col20a1Q923P0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col20a1Q923P0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col20a1Q923P0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col20a1Q923P0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col20a1Q923P0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC23.24■■□□□ 1.31
Col20a1Q923P0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col20a1Q923P0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Col20a1Q923P0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Col20a1Q923P0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Col20a1Q923P0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col20a1Q923P0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Col20a1Q923P0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col20a1Q923P0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col20a1Q923P0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Col20a1Q923P0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Col20a1Q923P0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col20a1Q923P0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col20a1Q923P0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col20a1Q923P0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col20a1Q923P0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC23.22■■□□□ 1.31
Col20a1Q923P0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Col20a1Q923P0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Col20a1Q923P0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC23.22■■□□□ 1.31
Col20a1Q923P0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC23.22■■□□□ 1.31
Col20a1Q923P0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Col20a1Q923P0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Col20a1Q923P0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col20a1Q923P0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col20a1Q923P0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col20a1Q923P0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Col20a1Q923P0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col20a1Q923P0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC23.21■■□□□ 1.31
Col20a1Q923P0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col20a1Q923P0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Col20a1Q923P0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Col20a1Q923P0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC23.2■■□□□ 1.31
Col20a1Q923P0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC23.2■■□□□ 1.3
Col20a1Q923P0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 112.9 ms