Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb2Q91Y00 Smad6-203ENSMUST00000179458 273 ntBASIC20.86■□□□□ 0.93
Pcdhb2Q91Y00 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb2Q91Y00 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb2Q91Y00 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb2Q91Y00 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb2Q91Y00 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pcdhb2Q91Y00 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb2Q91Y00 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb2Q91Y00 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb2Q91Y00 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb2Q91Y00 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb2Q91Y00 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb2Q91Y00 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Pcdhb2Q91Y00 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.85■□□□□ 0.93
Pcdhb2Q91Y00 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb2Q91Y00 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Pcdhb2Q91Y00 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Pcdhb2Q91Y00 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb2Q91Y00 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.84■□□□□ 0.93
Pcdhb2Q91Y00 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb2Q91Y00 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pcdhb2Q91Y00 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb2Q91Y00 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pcdhb2Q91Y00 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Pcdhb2Q91Y00 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.83■□□□□ 0.93
Pcdhb2Q91Y00 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb2Q91Y00 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb2Q91Y00 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.83■□□□□ 0.93
Pcdhb2Q91Y00 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.83■□□□□ 0.93
Pcdhb2Q91Y00 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
Pcdhb2Q91Y00 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb2Q91Y00 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb2Q91Y00 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb2Q91Y00 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb2Q91Y00 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.82■□□□□ 0.92
Pcdhb2Q91Y00 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb2Q91Y00 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb2Q91Y00 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.82■□□□□ 0.92
Pcdhb2Q91Y00 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb2Q91Y00 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb2Q91Y00 Gm11421-201ENSMUST00000122124 294 ntBASIC20.82■□□□□ 0.92
Pcdhb2Q91Y00 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb2Q91Y00 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb2Q91Y00 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb2Q91Y00 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb2Q91Y00 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb2Q91Y00 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhb2Q91Y00 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Pcdhb2Q91Y00 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb2Q91Y00 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb2Q91Y00 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb2Q91Y00 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Pcdhb2Q91Y00 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb2Q91Y00 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Pcdhb2Q91Y00 Gm43060-201ENSMUST00000200621 289 ntBASIC20.81■□□□□ 0.92
Pcdhb2Q91Y00 Gm40848-201ENSMUST00000221998 324 ntBASIC20.81■□□□□ 0.92
Pcdhb2Q91Y00 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.81■□□□□ 0.92
Pcdhb2Q91Y00 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdhb2Q91Y00 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb2Q91Y00 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb2Q91Y00 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb2Q91Y00 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb2Q91Y00 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb2Q91Y00 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb2Q91Y00 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb2Q91Y00 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb2Q91Y00 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb2Q91Y00 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Pcdhb2Q91Y00 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb2Q91Y00 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb2Q91Y00 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb2Q91Y00 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Pcdhb2Q91Y00 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb2Q91Y00 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb2Q91Y00 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb2Q91Y00 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdhb2Q91Y00 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Pcdhb2Q91Y00 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb2Q91Y00 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pcdhb2Q91Y00 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pcdhb2Q91Y00 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb2Q91Y00 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb2Q91Y00 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb2Q91Y00 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb2Q91Y00 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb2Q91Y00 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb2Q91Y00 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb2Q91Y00 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Pcdhb2Q91Y00 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Pcdhb2Q91Y00 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.77■□□□□ 0.92
Pcdhb2Q91Y00 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb2Q91Y00 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Pcdhb2Q91Y00 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb2Q91Y00 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb2Q91Y00 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb2Q91Y00 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Pcdhb2Q91Y00 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb2Q91Y00 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhb2Q91Y00 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms