Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.27■□□□□ 0.84
Lims2Q91XD2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Lims2Q91XD2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lims2Q91XD2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lims2Q91XD2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lims2Q91XD2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lims2Q91XD2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lims2Q91XD2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lims2Q91XD2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lims2Q91XD2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lims2Q91XD2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Lims2Q91XD2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lims2Q91XD2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lims2Q91XD2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lims2Q91XD2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lims2Q91XD2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Lims2Q91XD2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Lims2Q91XD2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.25■□□□□ 0.83
Lims2Q91XD2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Lims2Q91XD2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Lims2Q91XD2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lims2Q91XD2 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.25■□□□□ 0.83
Lims2Q91XD2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Lims2Q91XD2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lims2Q91XD2 Gm10493-201ENSMUST00000097270 612 ntBASIC20.24■□□□□ 0.83
Lims2Q91XD2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Lims2Q91XD2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Lims2Q91XD2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.24■□□□□ 0.83
Lims2Q91XD2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lims2Q91XD2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.24■□□□□ 0.83
Lims2Q91XD2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lims2Q91XD2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lims2Q91XD2 Gm8495-201ENSMUST00000188740 694 ntBASIC20.23■□□□□ 0.83
Lims2Q91XD2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.23■□□□□ 0.83
Lims2Q91XD2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.23■□□□□ 0.83
Lims2Q91XD2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lims2Q91XD2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lims2Q91XD2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Lims2Q91XD2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lims2Q91XD2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lims2Q91XD2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lims2Q91XD2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Lims2Q91XD2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lims2Q91XD2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lims2Q91XD2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lims2Q91XD2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.22■□□□□ 0.83
Lims2Q91XD2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Lims2Q91XD2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.22■□□□□ 0.83
Lims2Q91XD2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Lims2Q91XD2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
Lims2Q91XD2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lims2Q91XD2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lims2Q91XD2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.22■□□□□ 0.83
Lims2Q91XD2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lims2Q91XD2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lims2Q91XD2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lims2Q91XD2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lims2Q91XD2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Lims2Q91XD2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lims2Q91XD2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lims2Q91XD2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Lims2Q91XD2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lims2Q91XD2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lims2Q91XD2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lims2Q91XD2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.21■□□□□ 0.83
Lims2Q91XD2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.21■□□□□ 0.83
Lims2Q91XD2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lims2Q91XD2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lims2Q91XD2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lims2Q91XD2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lims2Q91XD2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Lims2Q91XD2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lims2Q91XD2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lims2Q91XD2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lims2Q91XD2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lims2Q91XD2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lims2Q91XD2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lims2Q91XD2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lims2Q91XD2 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.18■□□□□ 0.82
Lims2Q91XD2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lims2Q91XD2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.18■□□□□ 0.82
Lims2Q91XD2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.18■□□□□ 0.82
Lims2Q91XD2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
Lims2Q91XD2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lims2Q91XD2 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.18■□□□□ 0.82
Lims2Q91XD2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.18■□□□□ 0.82
Lims2Q91XD2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.18■□□□□ 0.82
Lims2Q91XD2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lims2Q91XD2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lims2Q91XD2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lims2Q91XD2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lims2Q91XD2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lims2Q91XD2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lims2Q91XD2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Lims2Q91XD2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lims2Q91XD2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lims2Q91XD2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Lims2Q91XD2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lims2Q91XD2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Lims2Q91XD2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms