Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Sh3d19Q91X43 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Sh3d19Q91X43 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3d19Q91X43 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3d19Q91X43 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.53■□□□□ 0.88
Sh3d19Q91X43 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3d19Q91X43 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3d19Q91X43 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3d19Q91X43 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3d19Q91X43 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.53■□□□□ 0.88
Sh3d19Q91X43 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3d19Q91X43 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.52■□□□□ 0.88
Sh3d19Q91X43 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3d19Q91X43 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3d19Q91X43 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3d19Q91X43 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Sh3d19Q91X43 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3d19Q91X43 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.52■□□□□ 0.88
Sh3d19Q91X43 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3d19Q91X43 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sh3d19Q91X43 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Sh3d19Q91X43 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sh3d19Q91X43 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Sh3d19Q91X43 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3d19Q91X43 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Sh3d19Q91X43 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.51■□□□□ 0.87
Sh3d19Q91X43 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.51■□□□□ 0.87
Sh3d19Q91X43 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Sh3d19Q91X43 Gm27801-201ENSMUST00000184174 223 ntBASIC20.51■□□□□ 0.87
Sh3d19Q91X43 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.51■□□□□ 0.87
Sh3d19Q91X43 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.51■□□□□ 0.87
Sh3d19Q91X43 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.51■□□□□ 0.87
Sh3d19Q91X43 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3d19Q91X43 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3d19Q91X43 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Sh3d19Q91X43 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3d19Q91X43 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.5■□□□□ 0.87
Sh3d19Q91X43 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3d19Q91X43 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3d19Q91X43 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3d19Q91X43 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3d19Q91X43 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.5■□□□□ 0.87
Sh3d19Q91X43 AA386476-201ENSMUST00000098781 1665 ntBASIC20.5■□□□□ 0.87
Sh3d19Q91X43 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.5■□□□□ 0.87
Sh3d19Q91X43 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3d19Q91X43 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3d19Q91X43 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3d19Q91X43 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Sh3d19Q91X43 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.5■□□□□ 0.87
Sh3d19Q91X43 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3d19Q91X43 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3d19Q91X43 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3d19Q91X43 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.49■□□□□ 0.87
Sh3d19Q91X43 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Sh3d19Q91X43 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3d19Q91X43 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3d19Q91X43 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3d19Q91X43 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3d19Q91X43 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3d19Q91X43 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3d19Q91X43 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3d19Q91X43 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Sh3d19Q91X43 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3d19Q91X43 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3d19Q91X43 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3d19Q91X43 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
Sh3d19Q91X43 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.48■□□□□ 0.87
Sh3d19Q91X43 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3d19Q91X43 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Sh3d19Q91X43 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3d19Q91X43 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3d19Q91X43 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.47■□□□□ 0.87
Sh3d19Q91X43 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3d19Q91X43 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3d19Q91X43 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.47■□□□□ 0.87
Sh3d19Q91X43 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3d19Q91X43 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3d19Q91X43 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3d19Q91X43 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3d19Q91X43 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.46■□□□□ 0.87
Sh3d19Q91X43 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3d19Q91X43 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3d19Q91X43 Gm10849-201ENSMUST00000100397 618 ntBASIC20.46■□□□□ 0.87
Sh3d19Q91X43 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.46■□□□□ 0.87
Sh3d19Q91X43 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.46■□□□□ 0.87
Sh3d19Q91X43 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3d19Q91X43 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.46■□□□□ 0.87
Sh3d19Q91X43 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3d19Q91X43 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Sh3d19Q91X43 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.45■□□□□ 0.86
Sh3d19Q91X43 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Sh3d19Q91X43 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.45■□□□□ 0.86
Sh3d19Q91X43 Gm26571-201ENSMUST00000181399 666 ntBASIC20.45■□□□□ 0.86
Sh3d19Q91X43 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.45■□□□□ 0.86
Sh3d19Q91X43 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh3d19Q91X43 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sh3d19Q91X43 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Sh3d19Q91X43 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh3d19Q91X43 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sh3d19Q91X43 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms