Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Slc44a4Q91VA1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Slc44a4Q91VA1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Slc44a4Q91VA1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Slc44a4Q91VA1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Slc44a4Q91VA1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Slc44a4Q91VA1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Slc44a4Q91VA1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Slc44a4Q91VA1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Slc44a4Q91VA1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC23.35■■□□□ 1.33
Slc44a4Q91VA1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Slc44a4Q91VA1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Slc44a4Q91VA1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Slc44a4Q91VA1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Slc44a4Q91VA1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Slc44a4Q91VA1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Slc44a4Q91VA1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Slc44a4Q91VA1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC23.34■■□□□ 1.33
Slc44a4Q91VA1 Gm38205-201ENSMUST00000192243 258 ntBASIC23.34■■□□□ 1.33
Slc44a4Q91VA1 Gm42555-201ENSMUST00000199304 1039 ntBASIC23.34■■□□□ 1.33
Slc44a4Q91VA1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Slc44a4Q91VA1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Slc44a4Q91VA1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Slc44a4Q91VA1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Slc44a4Q91VA1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Slc44a4Q91VA1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Slc44a4Q91VA1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC23.33■■□□□ 1.33
Slc44a4Q91VA1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Slc44a4Q91VA1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC23.33■■□□□ 1.33
Slc44a4Q91VA1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
Slc44a4Q91VA1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Slc44a4Q91VA1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Slc44a4Q91VA1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Slc44a4Q91VA1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC23.32■■□□□ 1.32
Slc44a4Q91VA1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Slc44a4Q91VA1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Slc44a4Q91VA1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Slc44a4Q91VA1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Slc44a4Q91VA1 Gm13146-201ENSMUST00000118508 780 ntBASIC23.32■■□□□ 1.32
Slc44a4Q91VA1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Slc44a4Q91VA1 CT010467.1-202ENSMUST00000205406 714 ntBASIC23.32■■□□□ 1.32
Slc44a4Q91VA1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC23.32■■□□□ 1.32
Slc44a4Q91VA1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Slc44a4Q91VA1 Snhg20-203ENSMUST00000182811 2153 ntBASIC23.31■■□□□ 1.32
Slc44a4Q91VA1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slc44a4Q91VA1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Slc44a4Q91VA1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slc44a4Q91VA1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Slc44a4Q91VA1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC23.31■■□□□ 1.32
Slc44a4Q91VA1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
Slc44a4Q91VA1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slc44a4Q91VA1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slc44a4Q91VA1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slc44a4Q91VA1 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.3■■□□□ 1.32
Slc44a4Q91VA1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Slc44a4Q91VA1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Slc44a4Q91VA1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Slc44a4Q91VA1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC23.3■■□□□ 1.32
Slc44a4Q91VA1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC23.3■■□□□ 1.32
Slc44a4Q91VA1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Slc44a4Q91VA1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Slc44a4Q91VA1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC23.3■■□□□ 1.32
Slc44a4Q91VA1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Slc44a4Q91VA1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Slc44a4Q91VA1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Slc44a4Q91VA1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Slc44a4Q91VA1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
Slc44a4Q91VA1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Slc44a4Q91VA1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.29■■□□□ 1.32
Slc44a4Q91VA1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Slc44a4Q91VA1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC23.28■■□□□ 1.32
Slc44a4Q91VA1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Slc44a4Q91VA1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Slc44a4Q91VA1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Slc44a4Q91VA1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Slc44a4Q91VA1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Slc44a4Q91VA1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Slc44a4Q91VA1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Slc44a4Q91VA1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Slc44a4Q91VA1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
Slc44a4Q91VA1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC23.27■■□□□ 1.32
Slc44a4Q91VA1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Slc44a4Q91VA1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Slc44a4Q91VA1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Slc44a4Q91VA1 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Slc44a4Q91VA1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
Slc44a4Q91VA1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Slc44a4Q91VA1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Slc44a4Q91VA1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Slc44a4Q91VA1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Slc44a4Q91VA1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC23.25■■□□□ 1.31
Slc44a4Q91VA1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Slc44a4Q91VA1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC23.25■■□□□ 1.31
Slc44a4Q91VA1 Mir5133-201ENSMUST00000174955 77 ntBASIC23.25■■□□□ 1.31
Slc44a4Q91VA1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC23.25■■□□□ 1.31
Slc44a4Q91VA1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Slc44a4Q91VA1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Slc44a4Q91VA1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Slc44a4Q91VA1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Slc44a4Q91VA1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms