Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Upb1Q8VC97 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Upb1Q8VC97 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Upb1Q8VC97 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Upb1Q8VC97 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Upb1Q8VC97 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Upb1Q8VC97 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Upb1Q8VC97 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Upb1Q8VC97 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Upb1Q8VC97 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Upb1Q8VC97 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Upb1Q8VC97 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Upb1Q8VC97 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.39■■□□□ 1.01
Upb1Q8VC97 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Upb1Q8VC97 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.38■■□□□ 1.01
Upb1Q8VC97 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Upb1Q8VC97 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.38■■□□□ 1.01
Upb1Q8VC97 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Upb1Q8VC97 AA386476-201ENSMUST00000098781 1665 ntBASIC21.37■■□□□ 1.01
Upb1Q8VC97 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upb1Q8VC97 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upb1Q8VC97 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upb1Q8VC97 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.37■■□□□ 1.01
Upb1Q8VC97 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Upb1Q8VC97 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.37■■□□□ 1.01
Upb1Q8VC97 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upb1Q8VC97 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upb1Q8VC97 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upb1Q8VC97 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.36■■□□□ 1.01
Upb1Q8VC97 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.36■■□□□ 1.01
Upb1Q8VC97 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Upb1Q8VC97 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Upb1Q8VC97 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.36■■□□□ 1.01
Upb1Q8VC97 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Upb1Q8VC97 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Upb1Q8VC97 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Upb1Q8VC97 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Upb1Q8VC97 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Upb1Q8VC97 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Upb1Q8VC97 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Upb1Q8VC97 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Upb1Q8VC97 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upb1Q8VC97 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.34■■□□□ 1.01
Upb1Q8VC97 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.34■■□□□ 1.01
Upb1Q8VC97 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
Upb1Q8VC97 Gm42642-201ENSMUST00000200683 355 ntBASIC21.34■■□□□ 1.01
Upb1Q8VC97 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.34■■□□□ 1.01
Upb1Q8VC97 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upb1Q8VC97 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Upb1Q8VC97 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upb1Q8VC97 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upb1Q8VC97 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Upb1Q8VC97 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Upb1Q8VC97 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.33■■□□□ 1.01
Upb1Q8VC97 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Upb1Q8VC97 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Upb1Q8VC97 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Upb1Q8VC97 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Upb1Q8VC97 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.33■■□□□ 1
Upb1Q8VC97 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
Upb1Q8VC97 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Upb1Q8VC97 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.32■■□□□ 1
Upb1Q8VC97 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Upb1Q8VC97 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Upb1Q8VC97 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Upb1Q8VC97 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Upb1Q8VC97 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.32■■□□□ 1
Upb1Q8VC97 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.32■■□□□ 1
Upb1Q8VC97 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
Upb1Q8VC97 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Upb1Q8VC97 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.32■■□□□ 1
Upb1Q8VC97 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Upb1Q8VC97 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Upb1Q8VC97 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.32■■□□□ 1
Upb1Q8VC97 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.31■■□□□ 1
Upb1Q8VC97 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.31■■□□□ 1
Upb1Q8VC97 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Upb1Q8VC97 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.31■■□□□ 1
Upb1Q8VC97 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Upb1Q8VC97 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.3■■□□□ 1
Upb1Q8VC97 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Upb1Q8VC97 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Upb1Q8VC97 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.3■■□□□ 1
Upb1Q8VC97 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.3■■□□□ 1
Upb1Q8VC97 Gm42778-201ENSMUST00000199644 553 ntBASIC21.3■■□□□ 1
Upb1Q8VC97 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.3■■□□□ 1
Upb1Q8VC97 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Upb1Q8VC97 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Upb1Q8VC97 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Upb1Q8VC97 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.3■■□□□ 1
Upb1Q8VC97 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Upb1Q8VC97 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Upb1Q8VC97 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.3■■□□□ 1
Upb1Q8VC97 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.29■■□□□ 1
Upb1Q8VC97 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Upb1Q8VC97 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.29■■□□□ 1
Upb1Q8VC97 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Upb1Q8VC97 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Upb1Q8VC97 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Upb1Q8VC97 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms