Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cd109Q8R422 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Cd109Q8R422 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Cd109Q8R422 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Cd109Q8R422 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Cd109Q8R422 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Cd109Q8R422 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
Cd109Q8R422 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Cd109Q8R422 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Cd109Q8R422 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC28.2■■■□□ 2.11
Cd109Q8R422 Gm37035-201ENSMUST00000194809 2148 ntBASIC28.2■■■□□ 2.1
Cd109Q8R422 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Cd109Q8R422 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Cd109Q8R422 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Cd109Q8R422 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Cd109Q8R422 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Cd109Q8R422 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
Cd109Q8R422 AC154266.1-201ENSMUST00000223190 503 ntBASIC28.19■■■□□ 2.1
Cd109Q8R422 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Cd109Q8R422 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
Cd109Q8R422 Gm15043-201ENSMUST00000118843 1543 ntBASIC28.19■■■□□ 2.1
Cd109Q8R422 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Cd109Q8R422 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Cd109Q8R422 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC28.18■■■□□ 2.1
Cd109Q8R422 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC28.18■■■□□ 2.1
Cd109Q8R422 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Cd109Q8R422 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Cd109Q8R422 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cd109Q8R422 Cdkn3-203ENSMUST00000227149 1952 ntBASIC28.17■■■□□ 2.1
Cd109Q8R422 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Cd109Q8R422 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cd109Q8R422 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Cd109Q8R422 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Cd109Q8R422 Gm43909-201ENSMUST00000203443 1876 ntBASIC28.16■■■□□ 2.1
Cd109Q8R422 Snhg20-203ENSMUST00000182811 2153 ntBASIC28.16■■■□□ 2.1
Cd109Q8R422 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Cd109Q8R422 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC28.16■■■□□ 2.1
Cd109Q8R422 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
Cd109Q8R422 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC28.16■■■□□ 2.1
Cd109Q8R422 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Cd109Q8R422 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
Cd109Q8R422 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
Cd109Q8R422 AA386476-201ENSMUST00000098781 1665 ntBASIC28.16■■■□□ 2.1
Cd109Q8R422 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC28.16■■■□□ 2.1
Cd109Q8R422 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
Cd109Q8R422 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Cd109Q8R422 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Cd109Q8R422 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Cd109Q8R422 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Cd109Q8R422 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC28.15■■■□□ 2.1
Cd109Q8R422 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Cd109Q8R422 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Cd109Q8R422 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Cd109Q8R422 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Cd109Q8R422 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Cd109Q8R422 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC28.13■■■□□ 2.09
Cd109Q8R422 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Cd109Q8R422 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Cd109Q8R422 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Cd109Q8R422 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Cd109Q8R422 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Cd109Q8R422 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Cd109Q8R422 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Cd109Q8R422 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Cd109Q8R422 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Cd109Q8R422 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC28.11■■■□□ 2.09
Cd109Q8R422 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC28.11■■■□□ 2.09
Cd109Q8R422 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
Cd109Q8R422 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
Cd109Q8R422 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Cd109Q8R422 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Cd109Q8R422 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC28.1■■■□□ 2.09
Cd109Q8R422 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Cd109Q8R422 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC28.1■■■□□ 2.09
Cd109Q8R422 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Cd109Q8R422 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Cd109Q8R422 Mir5133-201ENSMUST00000174955 77 ntBASIC28.09■■■□□ 2.09
Cd109Q8R422 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC28.09■■■□□ 2.09
Cd109Q8R422 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC28.09■■■□□ 2.09
Cd109Q8R422 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC28.09■■■□□ 2.09
Cd109Q8R422 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Cd109Q8R422 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Cd109Q8R422 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
Cd109Q8R422 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Cd109Q8R422 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Cd109Q8R422 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Cd109Q8R422 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC28.08■■■□□ 2.09
Cd109Q8R422 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Cd109Q8R422 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Cd109Q8R422 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Cd109Q8R422 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC28.08■■■□□ 2.09
Cd109Q8R422 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Cd109Q8R422 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Cd109Q8R422 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Cd109Q8R422 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Cd109Q8R422 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Cd109Q8R422 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Cd109Q8R422 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Cd109Q8R422 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
Cd109Q8R422 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms