Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp28Q8CGV8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Mmp28Q8CGV8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Mmp28Q8CGV8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.72■□□□□ 0.27
Mmp28Q8CGV8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.72■□□□□ 0.27
Mmp28Q8CGV8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.72■□□□□ 0.27
Mmp28Q8CGV8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp28Q8CGV8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp28Q8CGV8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp28Q8CGV8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp28Q8CGV8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp28Q8CGV8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp28Q8CGV8 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.72■□□□□ 0.27
Mmp28Q8CGV8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Mmp28Q8CGV8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Mmp28Q8CGV8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp28Q8CGV8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp28Q8CGV8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp28Q8CGV8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp28Q8CGV8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Mmp28Q8CGV8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp28Q8CGV8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp28Q8CGV8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Mmp28Q8CGV8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Mmp28Q8CGV8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp28Q8CGV8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Mmp28Q8CGV8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp28Q8CGV8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Mmp28Q8CGV8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp28Q8CGV8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp28Q8CGV8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp28Q8CGV8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.7■□□□□ 0.26
Mmp28Q8CGV8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp28Q8CGV8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Mmp28Q8CGV8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp28Q8CGV8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp28Q8CGV8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp28Q8CGV8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mmp28Q8CGV8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Mmp28Q8CGV8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Mmp28Q8CGV8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Mmp28Q8CGV8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp28Q8CGV8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp28Q8CGV8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp28Q8CGV8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Mmp28Q8CGV8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp28Q8CGV8 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.69■□□□□ 0.26
Mmp28Q8CGV8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp28Q8CGV8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp28Q8CGV8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp28Q8CGV8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp28Q8CGV8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp28Q8CGV8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.69■□□□□ 0.26
Mmp28Q8CGV8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.69■□□□□ 0.26
Mmp28Q8CGV8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp28Q8CGV8 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.69■□□□□ 0.26
Mmp28Q8CGV8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mmp28Q8CGV8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp28Q8CGV8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Mmp28Q8CGV8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp28Q8CGV8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp28Q8CGV8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Mmp28Q8CGV8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp28Q8CGV8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp28Q8CGV8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.68■□□□□ 0.26
Mmp28Q8CGV8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Mmp28Q8CGV8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp28Q8CGV8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.68■□□□□ 0.26
Mmp28Q8CGV8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp28Q8CGV8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp28Q8CGV8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Mmp28Q8CGV8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp28Q8CGV8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp28Q8CGV8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp28Q8CGV8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp28Q8CGV8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp28Q8CGV8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mmp28Q8CGV8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mmp28Q8CGV8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mmp28Q8CGV8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mmp28Q8CGV8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mmp28Q8CGV8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Mmp28Q8CGV8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Mmp28Q8CGV8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp28Q8CGV8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Mmp28Q8CGV8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.66■□□□□ 0.26
Mmp28Q8CGV8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp28Q8CGV8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.66■□□□□ 0.26
Mmp28Q8CGV8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.66■□□□□ 0.26
Mmp28Q8CGV8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp28Q8CGV8 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.66■□□□□ 0.26
Mmp28Q8CGV8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp28Q8CGV8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mmp28Q8CGV8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp28Q8CGV8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Mmp28Q8CGV8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp28Q8CGV8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mmp28Q8CGV8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Mmp28Q8CGV8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Mmp28Q8CGV8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms