Protein–RNA interactions for Protein: Q8CDN1

Uncharacterized protein C3orf20 homolog, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CDN1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q8CDN1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q8CDN1 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.29■□□□□ 0.84
Q8CDN1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Q8CDN1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Q8CDN1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q8CDN1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q8CDN1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q8CDN1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q8CDN1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Q8CDN1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q8CDN1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q8CDN1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.28■□□□□ 0.84
Q8CDN1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Q8CDN1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Q8CDN1 Gm27405-201ENSMUST00000184201 112 ntBASIC20.28■□□□□ 0.84
Q8CDN1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.28■□□□□ 0.84
Q8CDN1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Q8CDN1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q8CDN1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Q8CDN1 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.27■□□□□ 0.84
Q8CDN1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q8CDN1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q8CDN1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Q8CDN1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q8CDN1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q8CDN1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.27■□□□□ 0.84
Q8CDN1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q8CDN1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q8CDN1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.27■□□□□ 0.84
Q8CDN1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Q8CDN1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Q8CDN1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Q8CDN1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Q8CDN1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Q8CDN1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Q8CDN1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.26■□□□□ 0.83
Q8CDN1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q8CDN1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q8CDN1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q8CDN1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.26■□□□□ 0.83
Q8CDN1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q8CDN1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.26■□□□□ 0.83
Q8CDN1 Gm27801-201ENSMUST00000184174 223 ntBASIC20.26■□□□□ 0.83
Q8CDN1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Q8CDN1 Gm9988-201ENSMUST00000069786 435 ntBASIC20.26■□□□□ 0.83
Q8CDN1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.26■□□□□ 0.83
Q8CDN1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q8CDN1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Q8CDN1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.26■□□□□ 0.83
Q8CDN1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q8CDN1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q8CDN1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Q8CDN1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Q8CDN1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Q8CDN1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Q8CDN1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Q8CDN1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Q8CDN1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q8CDN1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.25■□□□□ 0.83
Q8CDN1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.25■□□□□ 0.83
Q8CDN1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Q8CDN1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q8CDN1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q8CDN1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Q8CDN1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Q8CDN1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.25■□□□□ 0.83
Q8CDN1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Q8CDN1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q8CDN1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Q8CDN1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.24■□□□□ 0.83
Q8CDN1 AV356131-201ENSMUST00000206201 750 ntBASIC20.24■□□□□ 0.83
Q8CDN1 Gm18671-201ENSMUST00000214826 683 ntBASIC20.24■□□□□ 0.83
Q8CDN1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q8CDN1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Q8CDN1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Q8CDN1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Q8CDN1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Q8CDN1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Q8CDN1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Q8CDN1 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.23■□□□□ 0.83
Q8CDN1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Q8CDN1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Q8CDN1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.23■□□□□ 0.83
Q8CDN1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Q8CDN1 Gm29257-201ENSMUST00000186115 639 ntBASIC20.23■□□□□ 0.83
Q8CDN1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Q8CDN1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Q8CDN1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.23■□□□□ 0.83
Q8CDN1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Q8CDN1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.23■□□□□ 0.83
Q8CDN1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Q8CDN1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q8CDN1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q8CDN1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q8CDN1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.22■□□□□ 0.83
Q8CDN1 Gm42778-201ENSMUST00000199644 553 ntBASIC20.22■□□□□ 0.83
Q8CDN1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q8CDN1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Q8CDN1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms