Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Kdm3aQ6PCM1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Kdm3aQ6PCM1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Kdm3aQ6PCM1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Kdm3aQ6PCM1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC23.8■■□□□ 1.4
Kdm3aQ6PCM1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Kdm3aQ6PCM1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Kdm3aQ6PCM1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Kdm3aQ6PCM1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
Kdm3aQ6PCM1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC23.79■■□□□ 1.4
Kdm3aQ6PCM1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Kdm3aQ6PCM1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Kdm3aQ6PCM1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Kdm3aQ6PCM1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Kdm3aQ6PCM1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Kdm3aQ6PCM1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC23.78■■□□□ 1.4
Kdm3aQ6PCM1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Kdm3aQ6PCM1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Kdm3aQ6PCM1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC23.78■■□□□ 1.4
Kdm3aQ6PCM1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Kdm3aQ6PCM1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Kdm3aQ6PCM1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Kdm3aQ6PCM1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Kdm3aQ6PCM1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Kdm3aQ6PCM1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Kdm3aQ6PCM1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Kdm3aQ6PCM1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Kdm3aQ6PCM1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC23.77■■□□□ 1.4
Kdm3aQ6PCM1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Kdm3aQ6PCM1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Kdm3aQ6PCM1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Kdm3aQ6PCM1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC23.76■■□□□ 1.39
Kdm3aQ6PCM1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Kdm3aQ6PCM1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Kdm3aQ6PCM1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Kdm3aQ6PCM1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Kdm3aQ6PCM1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC23.76■■□□□ 1.39
Kdm3aQ6PCM1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC23.76■■□□□ 1.39
Kdm3aQ6PCM1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC23.76■■□□□ 1.39
Kdm3aQ6PCM1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Kdm3aQ6PCM1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Kdm3aQ6PCM1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Kdm3aQ6PCM1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Kdm3aQ6PCM1 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Kdm3aQ6PCM1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
Kdm3aQ6PCM1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Kdm3aQ6PCM1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Kdm3aQ6PCM1 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.75■■□□□ 1.39
Kdm3aQ6PCM1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC23.75■■□□□ 1.39
Kdm3aQ6PCM1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Kdm3aQ6PCM1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.75■■□□□ 1.39
Kdm3aQ6PCM1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Kdm3aQ6PCM1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Kdm3aQ6PCM1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Kdm3aQ6PCM1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
Kdm3aQ6PCM1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Kdm3aQ6PCM1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Kdm3aQ6PCM1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Kdm3aQ6PCM1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Kdm3aQ6PCM1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Kdm3aQ6PCM1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Kdm3aQ6PCM1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Kdm3aQ6PCM1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Kdm3aQ6PCM1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Kdm3aQ6PCM1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC23.73■■□□□ 1.39
Kdm3aQ6PCM1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Kdm3aQ6PCM1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Kdm3aQ6PCM1 Gm42642-201ENSMUST00000200683 355 ntBASIC23.73■■□□□ 1.39
Kdm3aQ6PCM1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC23.73■■□□□ 1.39
Kdm3aQ6PCM1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Kdm3aQ6PCM1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Kdm3aQ6PCM1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Kdm3aQ6PCM1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Kdm3aQ6PCM1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Kdm3aQ6PCM1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Kdm3aQ6PCM1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Kdm3aQ6PCM1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Kdm3aQ6PCM1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Kdm3aQ6PCM1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Kdm3aQ6PCM1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
Kdm3aQ6PCM1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Kdm3aQ6PCM1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC23.72■■□□□ 1.39
Kdm3aQ6PCM1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Kdm3aQ6PCM1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Kdm3aQ6PCM1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Kdm3aQ6PCM1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC23.71■■□□□ 1.39
Kdm3aQ6PCM1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Kdm3aQ6PCM1 Gm10849-201ENSMUST00000100397 618 ntBASIC23.71■■□□□ 1.39
Kdm3aQ6PCM1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Kdm3aQ6PCM1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Kdm3aQ6PCM1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Kdm3aQ6PCM1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Kdm3aQ6PCM1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Kdm3aQ6PCM1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC23.7■■□□□ 1.38
Kdm3aQ6PCM1 Gm10033-202ENSMUST00000211874 928 ntBASIC23.7■■□□□ 1.38
Kdm3aQ6PCM1 Gm18671-201ENSMUST00000214826 683 ntBASIC23.7■■□□□ 1.38
Kdm3aQ6PCM1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Kdm3aQ6PCM1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Kdm3aQ6PCM1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Kdm3aQ6PCM1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms