Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Scube3Q66PY1 Gm26833-201ENSMUST00000180899 440 ntBASIC20.66■□□□□ 0.9
Scube3Q66PY1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Scube3Q66PY1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scube3Q66PY1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scube3Q66PY1 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.65■□□□□ 0.9
Scube3Q66PY1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scube3Q66PY1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scube3Q66PY1 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scube3Q66PY1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scube3Q66PY1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scube3Q66PY1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Scube3Q66PY1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.65■□□□□ 0.9
Scube3Q66PY1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Scube3Q66PY1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.65■□□□□ 0.9
Scube3Q66PY1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scube3Q66PY1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Scube3Q66PY1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scube3Q66PY1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
Scube3Q66PY1 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Scube3Q66PY1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Scube3Q66PY1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Scube3Q66PY1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scube3Q66PY1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scube3Q66PY1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Scube3Q66PY1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Scube3Q66PY1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scube3Q66PY1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scube3Q66PY1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Scube3Q66PY1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Scube3Q66PY1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scube3Q66PY1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scube3Q66PY1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scube3Q66PY1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scube3Q66PY1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scube3Q66PY1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
Scube3Q66PY1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Scube3Q66PY1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Scube3Q66PY1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Scube3Q66PY1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.62■□□□□ 0.89
Scube3Q66PY1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.62■□□□□ 0.89
Scube3Q66PY1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Scube3Q66PY1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.62■□□□□ 0.89
Scube3Q66PY1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scube3Q66PY1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Scube3Q66PY1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scube3Q66PY1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.62■□□□□ 0.89
Scube3Q66PY1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scube3Q66PY1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scube3Q66PY1 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.61■□□□□ 0.89
Scube3Q66PY1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scube3Q66PY1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scube3Q66PY1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.61■□□□□ 0.89
Scube3Q66PY1 Gm40848-201ENSMUST00000221998 324 ntBASIC20.61■□□□□ 0.89
Scube3Q66PY1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Scube3Q66PY1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Scube3Q66PY1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scube3Q66PY1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scube3Q66PY1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Scube3Q66PY1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Scube3Q66PY1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.61■□□□□ 0.89
Scube3Q66PY1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Scube3Q66PY1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Scube3Q66PY1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Scube3Q66PY1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Scube3Q66PY1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scube3Q66PY1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Scube3Q66PY1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.6■□□□□ 0.89
Scube3Q66PY1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Scube3Q66PY1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Scube3Q66PY1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Scube3Q66PY1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Scube3Q66PY1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scube3Q66PY1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scube3Q66PY1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scube3Q66PY1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scube3Q66PY1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scube3Q66PY1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.59■□□□□ 0.89
Scube3Q66PY1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Scube3Q66PY1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scube3Q66PY1 AA386476-201ENSMUST00000098781 1665 ntBASIC20.58■□□□□ 0.89
Scube3Q66PY1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scube3Q66PY1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Scube3Q66PY1 Gm11421-201ENSMUST00000122124 294 ntBASIC20.58■□□□□ 0.89
Scube3Q66PY1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scube3Q66PY1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Scube3Q66PY1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scube3Q66PY1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Scube3Q66PY1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Scube3Q66PY1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Scube3Q66PY1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scube3Q66PY1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scube3Q66PY1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scube3Q66PY1 Gm43060-201ENSMUST00000200621 289 ntBASIC20.57■□□□□ 0.88
Scube3Q66PY1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scube3Q66PY1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scube3Q66PY1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scube3Q66PY1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scube3Q66PY1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scube3Q66PY1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms