Protein–RNA interactions for Protein: Q61753

Phgdh, D-3-phosphoglycerate dehydrogenase, mousemouse

Known RBP Predictions only

Length 533 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PhgdhQ61753 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PhgdhQ61753 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PhgdhQ61753 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PhgdhQ61753 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PhgdhQ61753 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PhgdhQ61753 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.4■□□□□ 0.7
PhgdhQ61753 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.4■□□□□ 0.7
PhgdhQ61753 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PhgdhQ61753 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.4■□□□□ 0.7
PhgdhQ61753 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PhgdhQ61753 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PhgdhQ61753 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PhgdhQ61753 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PhgdhQ61753 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PhgdhQ61753 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PhgdhQ61753 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PhgdhQ61753 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PhgdhQ61753 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PhgdhQ61753 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PhgdhQ61753 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.4■□□□□ 0.7
PhgdhQ61753 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PhgdhQ61753 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PhgdhQ61753 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PhgdhQ61753 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.39■□□□□ 0.69
PhgdhQ61753 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.39■□□□□ 0.69
PhgdhQ61753 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PhgdhQ61753 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PhgdhQ61753 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PhgdhQ61753 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PhgdhQ61753 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PhgdhQ61753 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PhgdhQ61753 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PhgdhQ61753 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PhgdhQ61753 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PhgdhQ61753 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PhgdhQ61753 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
PhgdhQ61753 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.38■□□□□ 0.69
PhgdhQ61753 Gm9870-201ENSMUST00000063874 645 ntBASIC19.38■□□□□ 0.69
PhgdhQ61753 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PhgdhQ61753 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
PhgdhQ61753 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PhgdhQ61753 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PhgdhQ61753 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PhgdhQ61753 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PhgdhQ61753 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PhgdhQ61753 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PhgdhQ61753 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.36■□□□□ 0.69
PhgdhQ61753 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PhgdhQ61753 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PhgdhQ61753 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PhgdhQ61753 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.36■□□□□ 0.69
PhgdhQ61753 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PhgdhQ61753 Gm43530-201ENSMUST00000195920 274 ntBASIC19.36■□□□□ 0.69
PhgdhQ61753 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PhgdhQ61753 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PhgdhQ61753 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PhgdhQ61753 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PhgdhQ61753 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PhgdhQ61753 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PhgdhQ61753 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PhgdhQ61753 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PhgdhQ61753 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PhgdhQ61753 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
PhgdhQ61753 Mir6236-201ENSMUST00000184437 123 ntBASIC19.35■□□□□ 0.69
PhgdhQ61753 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.35■□□□□ 0.69
PhgdhQ61753 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PhgdhQ61753 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
PhgdhQ61753 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PhgdhQ61753 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PhgdhQ61753 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PhgdhQ61753 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PhgdhQ61753 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PhgdhQ61753 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PhgdhQ61753 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PhgdhQ61753 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PhgdhQ61753 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PhgdhQ61753 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PhgdhQ61753 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PhgdhQ61753 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PhgdhQ61753 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
PhgdhQ61753 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PhgdhQ61753 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PhgdhQ61753 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PhgdhQ61753 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PhgdhQ61753 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.33■□□□□ 0.69
PhgdhQ61753 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
PhgdhQ61753 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PhgdhQ61753 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PhgdhQ61753 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.33■□□□□ 0.68
PhgdhQ61753 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PhgdhQ61753 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PhgdhQ61753 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PhgdhQ61753 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PhgdhQ61753 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PhgdhQ61753 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PhgdhQ61753 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PhgdhQ61753 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
PhgdhQ61753 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PhgdhQ61753 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PhgdhQ61753 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms