Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
R3hdm4Q4VBF2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
R3hdm4Q4VBF2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
R3hdm4Q4VBF2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
R3hdm4Q4VBF2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
R3hdm4Q4VBF2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
R3hdm4Q4VBF2 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.27■■□□□ 1
R3hdm4Q4VBF2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.27■■□□□ 1
R3hdm4Q4VBF2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.27■■□□□ 1
R3hdm4Q4VBF2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
R3hdm4Q4VBF2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
R3hdm4Q4VBF2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
R3hdm4Q4VBF2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
R3hdm4Q4VBF2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
R3hdm4Q4VBF2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3hdm4Q4VBF2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
R3hdm4Q4VBF2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
R3hdm4Q4VBF2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3hdm4Q4VBF2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
R3hdm4Q4VBF2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
R3hdm4Q4VBF2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
R3hdm4Q4VBF2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
R3hdm4Q4VBF2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
R3hdm4Q4VBF2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
R3hdm4Q4VBF2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
R3hdm4Q4VBF2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3hdm4Q4VBF2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3hdm4Q4VBF2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.25■□□□□ 0.99
R3hdm4Q4VBF2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3hdm4Q4VBF2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3hdm4Q4VBF2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
R3hdm4Q4VBF2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
R3hdm4Q4VBF2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3hdm4Q4VBF2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.25■□□□□ 0.99
R3hdm4Q4VBF2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3hdm4Q4VBF2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3hdm4Q4VBF2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
R3hdm4Q4VBF2 AA386476-201ENSMUST00000098781 1665 ntBASIC21.24■□□□□ 0.99
R3hdm4Q4VBF2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
R3hdm4Q4VBF2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
R3hdm4Q4VBF2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
R3hdm4Q4VBF2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
R3hdm4Q4VBF2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
R3hdm4Q4VBF2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
R3hdm4Q4VBF2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
R3hdm4Q4VBF2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
R3hdm4Q4VBF2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
R3hdm4Q4VBF2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
R3hdm4Q4VBF2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
R3hdm4Q4VBF2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
R3hdm4Q4VBF2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
R3hdm4Q4VBF2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
R3hdm4Q4VBF2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.23■□□□□ 0.99
R3hdm4Q4VBF2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
R3hdm4Q4VBF2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
R3hdm4Q4VBF2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
R3hdm4Q4VBF2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
R3hdm4Q4VBF2 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.22■□□□□ 0.99
R3hdm4Q4VBF2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3hdm4Q4VBF2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3hdm4Q4VBF2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3hdm4Q4VBF2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3hdm4Q4VBF2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3hdm4Q4VBF2 Gm40848-201ENSMUST00000221998 324 ntBASIC21.22■□□□□ 0.99
R3hdm4Q4VBF2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3hdm4Q4VBF2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3hdm4Q4VBF2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
R3hdm4Q4VBF2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
R3hdm4Q4VBF2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
R3hdm4Q4VBF2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
R3hdm4Q4VBF2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
R3hdm4Q4VBF2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
R3hdm4Q4VBF2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
R3hdm4Q4VBF2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
R3hdm4Q4VBF2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
R3hdm4Q4VBF2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
R3hdm4Q4VBF2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
R3hdm4Q4VBF2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
R3hdm4Q4VBF2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
R3hdm4Q4VBF2 Gm26833-201ENSMUST00000180899 440 ntBASIC21.2■□□□□ 0.98
R3hdm4Q4VBF2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.2■□□□□ 0.98
R3hdm4Q4VBF2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
R3hdm4Q4VBF2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
R3hdm4Q4VBF2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
R3hdm4Q4VBF2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
R3hdm4Q4VBF2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
R3hdm4Q4VBF2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
R3hdm4Q4VBF2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
R3hdm4Q4VBF2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
R3hdm4Q4VBF2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
R3hdm4Q4VBF2 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.19■□□□□ 0.98
R3hdm4Q4VBF2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
R3hdm4Q4VBF2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
R3hdm4Q4VBF2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
R3hdm4Q4VBF2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
R3hdm4Q4VBF2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
R3hdm4Q4VBF2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
R3hdm4Q4VBF2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
R3hdm4Q4VBF2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
R3hdm4Q4VBF2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms