Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Uspl1Q3ULM6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Uspl1Q3ULM6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Uspl1Q3ULM6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Uspl1Q3ULM6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Uspl1Q3ULM6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Uspl1Q3ULM6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Uspl1Q3ULM6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Uspl1Q3ULM6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Uspl1Q3ULM6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
Uspl1Q3ULM6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC25.55■■□□□ 1.68
Uspl1Q3ULM6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC25.55■■□□□ 1.68
Uspl1Q3ULM6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Uspl1Q3ULM6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC25.55■■□□□ 1.68
Uspl1Q3ULM6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Uspl1Q3ULM6 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Uspl1Q3ULM6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
Uspl1Q3ULM6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC25.54■■□□□ 1.68
Uspl1Q3ULM6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Uspl1Q3ULM6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Uspl1Q3ULM6 Gm42911-201ENSMUST00000199360 1630 ntBASIC25.53■■□□□ 1.68
Uspl1Q3ULM6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Uspl1Q3ULM6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC25.53■■□□□ 1.68
Uspl1Q3ULM6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Uspl1Q3ULM6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Uspl1Q3ULM6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Uspl1Q3ULM6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Uspl1Q3ULM6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Uspl1Q3ULM6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Uspl1Q3ULM6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Uspl1Q3ULM6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Uspl1Q3ULM6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Uspl1Q3ULM6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Uspl1Q3ULM6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Uspl1Q3ULM6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Uspl1Q3ULM6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Uspl1Q3ULM6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC25.51■■□□□ 1.67
Uspl1Q3ULM6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Uspl1Q3ULM6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Uspl1Q3ULM6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Uspl1Q3ULM6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Uspl1Q3ULM6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Uspl1Q3ULM6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
Uspl1Q3ULM6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Uspl1Q3ULM6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Uspl1Q3ULM6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Uspl1Q3ULM6 Gm21168-201ENSMUST00000199646 1096 ntBASIC25.5■■□□□ 1.67
Uspl1Q3ULM6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Uspl1Q3ULM6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Uspl1Q3ULM6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Uspl1Q3ULM6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Uspl1Q3ULM6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Uspl1Q3ULM6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC25.49■■□□□ 1.67
Uspl1Q3ULM6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC25.49■■□□□ 1.67
Uspl1Q3ULM6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Uspl1Q3ULM6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Uspl1Q3ULM6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
Uspl1Q3ULM6 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Uspl1Q3ULM6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC25.48■■□□□ 1.67
Uspl1Q3ULM6 Gm26833-201ENSMUST00000180899 440 ntBASIC25.48■■□□□ 1.67
Uspl1Q3ULM6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Uspl1Q3ULM6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Uspl1Q3ULM6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Uspl1Q3ULM6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Uspl1Q3ULM6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Uspl1Q3ULM6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC25.47■■□□□ 1.67
Uspl1Q3ULM6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
Uspl1Q3ULM6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Uspl1Q3ULM6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Uspl1Q3ULM6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Uspl1Q3ULM6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC25.46■■□□□ 1.67
Uspl1Q3ULM6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Uspl1Q3ULM6 Gm10571-201ENSMUST00000097869 1638 ntBASIC25.46■■□□□ 1.67
Uspl1Q3ULM6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC25.46■■□□□ 1.67
Uspl1Q3ULM6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Uspl1Q3ULM6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Uspl1Q3ULM6 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Uspl1Q3ULM6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
Uspl1Q3ULM6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC25.45■■□□□ 1.67
Uspl1Q3ULM6 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Uspl1Q3ULM6 Gm11421-201ENSMUST00000122124 294 ntBASIC25.45■■□□□ 1.66
Uspl1Q3ULM6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC25.45■■□□□ 1.66
Uspl1Q3ULM6 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Uspl1Q3ULM6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Uspl1Q3ULM6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Uspl1Q3ULM6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Uspl1Q3ULM6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
Uspl1Q3ULM6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
Uspl1Q3ULM6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Uspl1Q3ULM6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Uspl1Q3ULM6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Uspl1Q3ULM6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Uspl1Q3ULM6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Uspl1Q3ULM6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Uspl1Q3ULM6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
Uspl1Q3ULM6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Uspl1Q3ULM6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
Uspl1Q3ULM6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Uspl1Q3ULM6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Uspl1Q3ULM6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms