Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim63Q38HM4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trim63Q38HM4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim63Q38HM4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim63Q38HM4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim63Q38HM4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim63Q38HM4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim63Q38HM4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim63Q38HM4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim63Q38HM4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim63Q38HM4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim63Q38HM4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim63Q38HM4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim63Q38HM4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim63Q38HM4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim63Q38HM4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim63Q38HM4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim63Q38HM4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim63Q38HM4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim63Q38HM4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim63Q38HM4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim63Q38HM4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim63Q38HM4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim63Q38HM4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim63Q38HM4 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.3■□□□□ 0.2
Trim63Q38HM4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim63Q38HM4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim63Q38HM4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim63Q38HM4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim63Q38HM4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim63Q38HM4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trim63Q38HM4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim63Q38HM4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim63Q38HM4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim63Q38HM4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim63Q38HM4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim63Q38HM4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim63Q38HM4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Trim63Q38HM4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trim63Q38HM4 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.29■□□□□ 0.2
Trim63Q38HM4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim63Q38HM4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim63Q38HM4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Trim63Q38HM4 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim63Q38HM4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim63Q38HM4 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim63Q38HM4 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim63Q38HM4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim63Q38HM4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim63Q38HM4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim63Q38HM4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim63Q38HM4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim63Q38HM4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim63Q38HM4 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim63Q38HM4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim63Q38HM4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim63Q38HM4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim63Q38HM4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim63Q38HM4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim63Q38HM4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim63Q38HM4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim63Q38HM4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim63Q38HM4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trim63Q38HM4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim63Q38HM4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim63Q38HM4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim63Q38HM4 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.27■□□□□ 0.2
Trim63Q38HM4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim63Q38HM4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim63Q38HM4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Trim63Q38HM4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
Trim63Q38HM4 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.27■□□□□ 0.19
Trim63Q38HM4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim63Q38HM4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim63Q38HM4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim63Q38HM4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trim63Q38HM4 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim63Q38HM4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim63Q38HM4 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim63Q38HM4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim63Q38HM4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim63Q38HM4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim63Q38HM4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim63Q38HM4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim63Q38HM4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim63Q38HM4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim63Q38HM4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim63Q38HM4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim63Q38HM4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim63Q38HM4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim63Q38HM4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim63Q38HM4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim63Q38HM4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trim63Q38HM4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim63Q38HM4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim63Q38HM4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim63Q38HM4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim63Q38HM4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim63Q38HM4 Gm24804-201ENSMUST00000174982 85 ntBASIC16.25■□□□□ 0.19
Trim63Q38HM4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms