Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col10a1Q05306 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col10a1Q05306 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col10a1Q05306 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.1■□□□□ 0.49
Col10a1Q05306 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.1■□□□□ 0.49
Col10a1Q05306 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col10a1Q05306 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col10a1Q05306 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col10a1Q05306 Gm8493-201ENSMUST00000196881 489 ntBASIC18.1■□□□□ 0.49
Col10a1Q05306 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.1■□□□□ 0.49
Col10a1Q05306 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col10a1Q05306 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col10a1Q05306 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col10a1Q05306 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col10a1Q05306 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Col10a1Q05306 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col10a1Q05306 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.09■□□□□ 0.49
Col10a1Q05306 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col10a1Q05306 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Col10a1Q05306 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col10a1Q05306 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Col10a1Q05306 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col10a1Q05306 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col10a1Q05306 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Col10a1Q05306 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.09■□□□□ 0.49
Col10a1Q05306 Gm6139-201ENSMUST00000079261 882 ntBASIC18.09■□□□□ 0.49
Col10a1Q05306 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.09■□□□□ 0.49
Col10a1Q05306 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col10a1Q05306 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col10a1Q05306 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Col10a1Q05306 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Col10a1Q05306 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.08■□□□□ 0.49
Col10a1Q05306 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Col10a1Q05306 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col10a1Q05306 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Col10a1Q05306 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.08■□□□□ 0.48
Col10a1Q05306 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col10a1Q05306 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col10a1Q05306 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col10a1Q05306 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Col10a1Q05306 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Col10a1Q05306 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col10a1Q05306 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col10a1Q05306 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col10a1Q05306 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.07■□□□□ 0.48
Col10a1Q05306 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.07■□□□□ 0.48
Col10a1Q05306 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col10a1Q05306 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col10a1Q05306 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col10a1Q05306 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col10a1Q05306 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col10a1Q05306 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
Col10a1Q05306 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Col10a1Q05306 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col10a1Q05306 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col10a1Q05306 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col10a1Q05306 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col10a1Q05306 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col10a1Q05306 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.06■□□□□ 0.48
Col10a1Q05306 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col10a1Q05306 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col10a1Q05306 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col10a1Q05306 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col10a1Q05306 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Col10a1Q05306 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Col10a1Q05306 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Col10a1Q05306 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col10a1Q05306 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col10a1Q05306 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Col10a1Q05306 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col10a1Q05306 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col10a1Q05306 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col10a1Q05306 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col10a1Q05306 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Col10a1Q05306 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Col10a1Q05306 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Col10a1Q05306 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col10a1Q05306 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.04■□□□□ 0.48
Col10a1Q05306 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.04■□□□□ 0.48
Col10a1Q05306 Gm43173-201ENSMUST00000202246 593 ntBASIC18.04■□□□□ 0.48
Col10a1Q05306 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col10a1Q05306 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col10a1Q05306 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col10a1Q05306 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col10a1Q05306 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col10a1Q05306 Iqck-206ENSMUST00000208658 2891 ntBASIC18.03■□□□□ 0.48
Col10a1Q05306 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.03■□□□□ 0.48
Col10a1Q05306 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col10a1Q05306 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Col10a1Q05306 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Col10a1Q05306 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col10a1Q05306 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col10a1Q05306 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Col10a1Q05306 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col10a1Q05306 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col10a1Q05306 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col10a1Q05306 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col10a1Q05306 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
Col10a1Q05306 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col10a1Q05306 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 165.5 ms